LOCUS       XM_011245497            2020 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X3, mRNA.
ACCESSION   XM_011245497
VERSION     XM_011245497.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011245497.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..2020
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 18 ESTs, 804 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 54 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             166..1578
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X2"
                     /protein_id="XP_011243799.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCL
                     NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVK
                     GYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ
                     VTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTT
                     TPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTT
                     STVPCVTNKLKGEKQRFSPY"
ORIGIN      
        1 ttcccgcccg cccctattgt tccgcccccg gcctcccgcc cttccccttc ccgcccgctc
       61 cccttttccc ctcagtcgac tcgcgcctcc agtttttggc tttcactctt caccagtgac
      121 caaagacttg accactcaaa gtccagctcc ctgtaactgc tagacatgga caccggtgtg
      181 attgaaggtg gattaaatgt cactctcacc atcaggctac ttatgcatgg aaaggaagtt
      241 ggcagtatca tcggaaagaa aggagaatct gttaagaaga tgcgcgagga gagtggtgca
      301 cgtatcaaca tctcagaagg gaattgtcct gagagaatta tcactttggc tggaccgact
      361 aatgccatct tcaaagcctt tgctatgatc attgacaaac tggaagagga cataagcagc
      421 tctatgacca atagtacagc tgccagtaga cccccggtta ccttacggct ggtggttcct
      481 gctagtcagt gtggctctct tattggaaaa ggtggttgca agatcaagga aataagagag
      541 agtacagggg ctcaggtcca ggtggcaggg gatatgctcc ccaactcaac tgagcgggca
      601 atcactattg ctggcattcc gcagtccatc attgagtgtg tcaaacagat ctgcgtggtc
      661 atgttggaga ctctctccca gtcccccccg aagggcgtga ccatcccgta ccggcccaag
      721 ccctccagtt ctccagtcat ctttgcaggt ggtcaggaca ggtacagcac aggcagcgac
      781 agtgcgagct ttccccacac caccccgtcc atgtgcctca accctgacct ggagggacca
      841 cctctagagg cctataccat tcaaggacag tatgccattc cacagccaga tttgaccaag
      901 ctgcaccagt tggcaatgca acagtctcat tttcccatga cccatggcaa caccggattc
      961 agtggcattg aatccagctc tccagaggtg aaaggctatt ggggtttgga tgcatctgct
     1021 caaactactt ctcatgaact caccattcca aatgatttga ttggctgcat aatcgggcgt
     1081 caaggcgcca aaatcaatga gatccgtcag atgtctgggg cgcagatcaa aattgcaaac
     1141 ccagtggaag gatctactga tcggcaggtt accatcactg gatctgctgc cagcattagc
     1201 ctggctcagt atctaatcaa tgtcagttta gaaaacgcta aaccctcctc ccaggcagcc
     1261 tccgtcacga tccctgatca cctcagcatc aacctctctc aaccctccac cccttcttct
     1321 tcttcttcct cttccaccac caccccctcg ctcgccacag cggggacttc cgacgcaccc
     1381 tccagcctcc ccaaccctct tccgaccgcc ccttgtgtct ccagtctgct tggcatgaaa
     1441 cccatccctc tcctggctct aaatgttgtg tctgctgcta agggtaccgg ggcttcagct
     1501 accaccacca ccacctctac tgtgccatgt gtaactaaca aactgaaagg cgagaagcag
     1561 agattctctc cctactgagt gcttatcttg gcatttcctc aagtgtttgt ttattttgtt
     1621 tttctttgtt aacattggtg agaaccaaac tattgtgagc ttgtgatcat tttcttttta
     1681 ctactttggg ggataactgg gtgggaatgg aaacaggggt aatacttgtt tagggttagg
     1741 tcttcacagc tcagtgcctg ttcagagtct gacttgttga ttgaaatctc tatctagagc
     1801 cacagttctt actctttaat tctgttatac ttttttgtag ctttattctg ccttgcaata
     1861 taaaaaatgt gttaggctct gtgttgatga ataaaagctt ctcctttagt cctttctttt
     1921 ttttttaact ttaaatcatt taatggttaa agctgtcagc tggacttctt ggctgaatct
     1981 gtgttctagt tataataaag ttgccacagt aagaacagta
//
