LOCUS       XM_011245495            2023 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X1, mRNA.
ACCESSION   XM_011245495
VERSION     XM_011245495.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011245495.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..2023
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 19 ESTs, 993 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 54 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             166..1581
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X1"
                     /protein_id="XP_011243797.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCL
                     NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVK
                     GYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR
                     QVTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSST
                     TTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTT
                     TSTVPCVTNKLKGEKQRFSPY"
ORIGIN      
        1 ttcccgcccg cccctattgt tccgcccccg gcctcccgcc cttccccttc ccgcccgctc
       61 cccttttccc ctcagtcgac tcgcgcctcc agtttttggc tttcactctt caccagtgac
      121 caaagacttg accactcaaa gtccagctcc ctgtaactgc tagacatgga caccggtgtg
      181 attgaaggtg gattaaatgt cactctcacc atcaggctac ttatgcatgg aaaggaagtt
      241 ggcagtatca tcggaaagaa aggagaatct gttaagaaga tgcgcgagga gagtggtgca
      301 cgtatcaaca tctcagaagg gaattgtcct gagagaatta tcactttggc tggaccgact
      361 aatgccatct tcaaagcctt tgctatgatc attgacaaac tggaagagga cataagcagc
      421 tctatgacca atagtacagc tgccagtaga cccccggtta ccttacggct ggtggttcct
      481 gctagtcagt gtggctctct tattggaaaa ggtggttgca agatcaagga aataagagag
      541 agtacagggg ctcaggtcca ggtggcaggg gatatgctcc ccaactcaac tgagcgggca
      601 atcactattg ctggcattcc gcagtccatc attgagtgtg tcaaacagat ctgcgtggtc
      661 atgttggaga ctctctccca gtcccccccg aagggcgtga ccatcccgta ccggcccaag
      721 ccctccagtt ctccagtcat ctttgcaggt ggtcaggaca ggtacagcac aggcagcgac
      781 agtgcgagct ttccccacac caccccgtcc atgtgcctca accctgacct ggagggacca
      841 cctctagagg cctataccat tcaaggacag tatgccattc cacagccaga tttgaccaag
      901 ctgcaccagt tggcaatgca acagtctcat tttcccatga cccatggcaa caccggattc
      961 agtggcattg aatccagctc tccagaggtg aaaggctatt gggcaggttt ggatgcatct
     1021 gctcaaacta cttctcatga actcaccatt ccaaatgatt tgattggctg cataatcggg
     1081 cgtcaaggcg ccaaaatcaa tgagatccgt cagatgtctg gggcgcagat caaaattgca
     1141 aacccagtgg aaggatctac tgatcggcag gttaccatca ctggatctgc tgccagcatt
     1201 agcctggctc agtatctaat caatgtcagt ttagaaaacg ctaaaccctc ctcccaggca
     1261 gcctccgtca cgatccctga tcacctcagc atcaacctct ctcaaccctc caccccttct
     1321 tcttcttctt cctcttccac caccaccccc tcgctcgcca cagcggggac ttccgacgca
     1381 ccctccagcc tccccaaccc tcttccgacc gccccttgtg tctccagtct gcttggcatg
     1441 aaacccatcc ctctcctggc tctaaatgtt gtgtctgctg ctaagggtac cggggcttca
     1501 gctaccacca ccaccacctc tactgtgcca tgtgtaacta acaaactgaa aggcgagaag
     1561 cagagattct ctccctactg agtgcttatc ttggcatttc ctcaagtgtt tgtttatttt
     1621 gtttttcttt gttaacattg gtgagaacca aactattgtg agcttgtgat cattttcttt
     1681 ttactacttt gggggataac tgggtgggaa tggaaacagg ggtaatactt gtttagggtt
     1741 aggtcttcac agctcagtgc ctgttcagag tctgacttgt tgattgaaat ctctatctag
     1801 agccacagtt cttactcttt aattctgtta tacttttttg tagctttatt ctgccttgca
     1861 atataaaaaa tgtgttaggc tctgtgttga tgaataaaag cttctccttt agtcctttct
     1921 ttttttttta actttaaatc atttaatggt taaagctgtc agctggactt cttggctgaa
     1981 tctgtgttct agttataata aagttgccac agtaagaaca gta
//
