LOCUS       NM_001405746            2786 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus phenazine biosynthesis-like protein domain containing
            2 (Pbld2), transcript variant 4, mRNA.
ACCESSION   NM_001405746 XM_036155961
VERSION     NM_001405746.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113107.15.
            
            On May 3, 2022 this sequence version replaced XM_036155961.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.458523.1,
                                           SRR17253012.5391583.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849376, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-799               AC113107.15        131988-132786
            800-943             AC113107.15        148537-148680
            944-1043            AC113107.15        156916-157015
            1044-1142           AC113107.15        157390-157488
            1143-1252           AC113107.15        161649-161758
            1253-1282           AC113107.15        161877-161906
            1283-1371           AC113107.15        163312-163400
            1372-1550           AC113107.15        163775-163953
            1551-1613           AC113107.15        166227-166289
            1614-2786           AC113107.15        167089-168261
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 32.52 cM"
     gene            1..2786
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /note="phenazine biosynthesis-like protein domain
                     containing 2"
                     /db_xref="GeneID:67307"
                     /db_xref="MGI:MGI:1914557"
     exon            1..799
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            800..943
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     CDS             860..1726
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /note="MAWD binding protein homolog 2"
                     /codon_start=1
                     /product="phenazine biosynthesis-like domain-containing
                     protein 2"
                     /protein_id="NP_001392675.1"
                     /db_xref="GeneID:67307"
                     /db_xref="MGI:MGI:1914557"
                     /translation="MKLPIFIADAFTATAFRGNPAAVCLLERTLDEDAHQDIAREMNL
                     SETAFVRKLQPTDDFTQSSRFGLRWFTPEAEFPLCGHATLASAAVLFQKRKNTNSTLT
                     FVTMSGELKARREEDGIVLDFPVYPTFPQDFHEVEDLIKAAIGDTLVQDIRYSPDTKN
                     LLVRLSDSYDRSFLESLKVNTEPLPAIEKTGKVRGLILTVKGEPGGQTALYDFYSRCF
                     APWVGVAEDPVTGSTHTLLGPYWSEELGKKEMRAFQCSRRGGELDINLRPDGRVDIKG
                     GAVIVLEGTLTA"
     exon            944..1043
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1044..1142
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1143..1252
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..1282
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1283..1371
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1372..1550
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1551..1613
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     exon            1614..2786
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2766..2771
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /note="hexamer: AATAAA"
     polyA_site      2786
                     /gene="Pbld2"
                     /gene_synonym="3110049J23Rik; Mawbp"
                     /note="major polyA site"
ORIGIN      
        1 tttttccttt ttaacccatt ttcaatgaaa attaatgaca gttccaattt aaggacccaa
       61 aacgcgtcaa ctaggtacgc gattcggctt ccaatttaag gacccaaaac gcgtcaacta
      121 ggtacgcgat tcggcttcca ctttaagaga cctatttcgg cttcaaaaca ccacagttcg
      181 atacaagttt taaacatgct cagccatcaa atgaaacgaa atgcactggg ctttcggcct
      241 taattacaaa acgacacaaa acacaactcc tggagagtta actaccccaa acacaactta
      301 actctccacc cttgcctaaa cgcagcacct tcgcagttca cctggcccgg acctgtttga
      361 aacacaccca ctttgcacta ttcctattag aaaagccatg cacttctctt ccaaaatgaa
      421 aagtcttggt cgacacctaa gagggggaca tggggtaggt gggtggtaat tctttggaga
      481 tgcgcaacgg actctctccg cagttccaaa tagggactaa aaggtcggct aagcgtcctt
      541 tgcctcctcc cggagatttt ccgtttgccc agctcgccct agagacccgg gagatagggg
      601 acagtccgcc tccggccccc ggccaaggcc atcgcaaccg agcggcggaa ttacaaagga
      661 ggaccgcggc cgcctttgtc ctgcatctgg catcggagcg ccctcgtcgt cactggcttc
      721 tccttccccc gcccccagct ccccctgtct caaccctgga gtctgcgtca gcagcccctc
      781 gcagccccgc cggccccagc tggaagtgaa acgggctccg agcagggcag ggagccctca
      841 gacagagcca gcgaggaaaa tgaagctccc aatcttcata gcagatgcgt tcactgcgac
      901 agctttccgg ggcaatcctg ccgcagtctg cctcctggag cgcacattgg atgaagatgc
      961 tcatcaggac attgcaaggg aaatgaacct ctctgaaacc gcttttgtcc gcaaactgca
     1021 accaactgat gacttcacac aaagttcccg ttttgggctg aggtggttta ccccagaggc
     1081 cgagttcccc ttgtgtggcc acgccacgct ggcttctgca gctgtgctgt ttcaaaaaag
     1141 aaagaacacg aacagcaccc tgacctttgt cacaatgagc ggggagctaa aggccagaag
     1201 agaagaagat gggatcgtcc tggactttcc tgtctaccca accttccccc aggacttcca
     1261 tgaagttgaa gacttgataa aggcagccat aggtgacacc ctggtccagg acatccggta
     1321 ctctccagat accaaaaacc tcctggtccg gctcagcgat tcttatgaca ggtcctttct
     1381 agagagcctg aaggtgaaca cagagcctct gcctgcaatt gagaagacag ggaaggtgag
     1441 aggcctcatc ctcactgtca aaggagagcc tggggggcag acagccctgt atgacttcta
     1501 ctccagatgc ttcgcgccgt gggttggtgt ggctgaagac ccggtgacag ggtccaccca
     1561 cactcttctt ggcccctact ggtctgagga gctggggaag aaggaaatgc gagcctttca
     1621 gtgttcccgc cgaggagggg agctggacat taacctgcga cctgatgggc gcgttgacat
     1681 aaagggcgga gctgttattg tcttggaggg cacgctgacc gcctagagat gttcctgctg
     1741 ggcttggggc cactgttcta catggtgtct tctctagagc gcagaaccca acccaactca
     1801 acagcaaatg cacagagctt ggttcagtcg tcgtgtgaac ccaaaaggga agacacctga
     1861 tggaggtgcg gtagtgtctc cagaatcctt ttcctgatgg tgggctctga gctctgcctg
     1921 tgtgtgcatc ttcagtcccc acagcagata gggatgctgc cccttctttt gatcatgact
     1981 gccaatcaaa gtgagaggtg cattgataag gaacgagaag aaatttagaa tgataaaggc
     2041 attgacacga aatgagaaga aatttagaca tatgtgtggg ggccttatag atgatttatt
     2101 ttctgagaca ggatttctct gtgtagctct ggctgtcctc taactcacag acatctgcct
     2161 gcttctgtct ctagtgtgtt ggattaaagg cacgtgccac catcaaatgg tttctgatag
     2221 attttacaaa ttgtgtgtgt gtgtgtgtgt gtgtgtaatt ttaatttaaa gacagggtct
     2281 tactgtatag ccgtggctgg gaagaaactc tctatgtaga ccaagctagc ctccaactcg
     2341 acccctgcct acctctgcgt ctccagtgct gggttaatgc tatgcaccat catgcccaga
     2401 gtcacaatca ttgtaatcga cccaataact ctgtggaaat gcaggcgcag tactaaagac
     2461 agtagactgt aaactgtccc aggggcttca cttgggctct gtggaatatt gattcacgcg
     2521 actgtggaga cagccagggg agacagttca tgtggaaaga ctcagaggag gcctagtgtt
     2581 taggaaacaa atcctttgta ttttgaactc agctaggagt aacaatcagg acaaacccag
     2641 gagattacaa cagtaggtat ctgatttggt gatgtgatga tcaaaataca cgctaagggc
     2701 gtgtgagacg aaatctttcc ctcctgtgtg gcttagaatg gccatgtcat tgtcttctct
     2761 tgtttaataa agcgtgattt aatcca
//
