LOCUS       NM_001033783            2342 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus prostate and testis expressed 9 (Pate9), mRNA.
ACCESSION   NM_001033783 XM_486210 XM_914407
VERSION     NM_001033783.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S and
            Swamynathan SK.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Levitin F, Weiss M, Hahn Y, Stern O, Papke RL, Matusik R, Nandana
            SR, Ziv R, Pichinuk E, Salame S, Bera T, Vincent J, Lee B, Pastan I
            and Wreschner DH.
  TITLE     PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR
            proteins that are expressed in reproductive and neuron-rich tissues
            and possess neuromodulatory activity
  JOURNAL   J Biol Chem 283 (24), 16928-16939 (2008)
   PUBMED   18387948
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159896.3.
            
            On Apr 6, 2007 this sequence version replaced NM_001033783.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK136744.1, BY721155.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-158               AC159896.3         25892-26049
            159-272             AC159896.3         32808-32921
            273-2342            AC159896.3         33383-35452
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 20.65 cM"
     gene            1..2342
                     /gene="Pate9"
                     /gene_synonym="EG434396; Gm5615; Pate-H"
                     /note="prostate and testis expressed 9"
                     /db_xref="GeneID:434396"
                     /db_xref="MGI:MGI:3647347"
     exon            1..158
                     /gene="Pate9"
                     /gene_synonym="EG434396; Gm5615; Pate-H"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..397
                     /gene="Pate9"
                     /gene_synonym="EG434396; Gm5615; Pate-H"
                     /note="prostate and testis expressed H"
                     /codon_start=1
                     /product="prostate and testis expressed H precursor"
                     /protein_id="NP_001028955.1"
                     /db_xref="CCDS:CCDS52766.1"
                     /db_xref="GeneID:434396"
                     /db_xref="MGI:MGI:3647347"
                     /translation="MNPVTKISTLLIVTLPFICFAEALKCFQCTLFNSKGKCLFQEPP
                     CETQNNEVCVLWAKFEGGRFMYGFQECSHTCVNQTLNLRNKRIEMKCCNDKSFCNKF"
     exon            159..272
                     /gene="Pate9"
                     /gene_synonym="EG434396; Gm5615; Pate-H"
                     /inference="alignment:Splign:2.1.0"
     exon            273..2342
                     /gene="Pate9"
                     /gene_synonym="EG434396; Gm5615; Pate-H"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcctatgt tggagattcc ttcctggtct ttagctctat aaagagagcg aatggtcata
       61 ctttacctca agttgccttc taacatccaa catgaatccg gtgacaaaaa tcagtacact
      121 gcttatcgtg actttaccct ttatctgctt tgcggaggct ctgaaatgct tccagtgcac
      181 tttgttcaac tctaagggga aatgtttgtt ccaagaaccc ccctgtgaga cccaaaataa
      241 tgaagtatgt gtcttgtggg caaagtttga aggtggcagg ttcatgtatg ggttccagga
      301 atgttctcac acttgtgtta atcaaacact gaacttgaga aataaaagaa ttgaaatgaa
      361 atgttgcaat gacaaatctt tctgcaacaa gttttagaag cataaaccat cttgacatgt
      421 tccaaggaca gttctgagcc cttcatcctc ctcctgtgcc ctcacaacac tgcaccatct
      481 attccagcac tgcccatgct ctgatacctg cttgtactct gcaccaggtg tggctatttg
      541 gacagttcag ctggggatag agaaatgccc tgtggtcccc acaaccctca gtgcttctcc
      601 ctcttttgta gatcctgatt tccttccttc tcaccttcta gtcttccagg actgacagat
      661 tgcacactct tctgctgctc atactgactt gtttttgtca aatgcatctg ataactaata
      721 ctgttgttag gtgctagttc tccaacagtg actatggcag agatgacacc tgcccttgat
      781 gaccagttca gtgatgcatt tttctattcg gttggccatc aaacaatagc tctagcatct
      841 tactgcagtt ttattcatag aatttcatgt gtgtgtcagg gagttttgca ctgctgtggc
      901 ctgagtagaa caacataagg gacacctagg tgaggtggca tatgccttaa accccagcac
      961 ttgagaggca aaggcaggag gatttctatg agtctgaggc tagattgttc tacttagcaa
     1021 tagtgcctca acacacacac acacacacac acacacacac acacacacac acacacacac
     1081 acactcacac acacacacac actcacacat gcacgcacat gcacacatgt gcacacattt
     1141 tccccttcag agcacctgtg tcctactagc tccatctctg gagagtactt gagttcacat
     1201 aatttcattt aatctctttt tatgttgtga atattttcct ccagtcaata actttttaga
     1261 tgctcaacat tgcctttcca agagcaacag acattgattt ttaataatat tgtctgtagt
     1321 ttcattaagt tgcttcgcta aaacactgtg atggaaaaca atttagaggt gagcttgttt
     1381 atgtaacctt agaggctaca gtgaggctct aatgtgtcac caccagcttc tcctatggac
     1441 tggatgtgtg agttaccaga gatccatatg ttcaagttta gtccctgaga tggtgaaatt
     1501 tggaagtgag gcttttggga ggagattaag ttatgagggt agacccataa caaatgagac
     1561 tcatgccctt atctaagaga caaatacagg aattcctagt atttatgtat ttatgaatat
     1621 acatatacat aaatatccat atatttatgt aacaacagtg aaaaagaggc catgaatttg
     1681 aaaagaagca agggagatat aagggaaagt ttggagggag aaaagaaaga ggaatttata
     1741 gttataagaa aaggagtata attatgctat aatctcaaaa aatgaaaaat gatttaaaat
     1801 tttcttgttc agaagctgga tagtctattc attttctttc ttttctcttc agcgtcctaa
     1861 atgaactgag gcaacgactt atctaagata tcaaaattat ttgctaacgt caaaattctt
     1921 agagaataca aatactcctt tatttctgta attttaaact ttggagtttt atatttgttt
     1981 tgtcatgcat tttacttaat gtgtatacta tttatggtgg atcaaagata ttttgtttct
     2041 ttattttttg cccatgaatg tccaattatc ttttgataat ttgtttgaaa ctcctttctt
     2101 ctcataatta taaaggccaa gtgtccacat ccatgtaagt ttatagcaaa attctatatt
     2161 tttctttctt tcattatatc ccactatttt ccttgataac tgtagagttt ttggaccttt
     2221 aaaatcagac aatgtgtctt ctaattttgc tcctttttta aaagttaatt tgagtatttt
     2281 aaggtctttg aattgctata gatattttca gatcatcgta ttgatttcta ataaaatgat
     2341 tg
//
