LOCUS       NM_001167673             643 bp    mRNA    linear   ROD 09-OCT-2020
DEFINITION  Mus musculus prostate and testis expressed 7 (Pate7), mRNA.
ACCESSION   NM_001167673
VERSION     NM_001167673.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S and
            Swamynathan SK.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Levitin F, Weiss M, Hahn Y, Stern O, Papke RL, Matusik R, Nandana
            SR, Ziv R, Pichinuk E, Salame S, Bera T, Vincent J, Lee B, Pastan I
            and Wreschner DH.
  TITLE     PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR
            proteins that are expressed in reproductive and neuron-rich tissues
            and possess neuromodulatory activity
  JOURNAL   J Biol Chem 283 (24), 16928-16939 (2008)
   PUBMED   18387948
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC113081.8.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849381
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-276               AC113081.8         68281-68556
            277-405             AC113081.8         69155-69283
            406-643             AC113081.8         69629-69866
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 20.44 cM"
     gene            1..643
                     /gene="Pate7"
                     /gene_synonym="Gm17727; Pate-e"
                     /note="prostate and testis expressed 7"
                     /db_xref="GeneID:100312986"
                     /db_xref="MGI:MGI:4937361"
     exon            1..276
                     /gene="Pate7"
                     /gene_synonym="Gm17727; Pate-e"
                     /inference="alignment:Splign:2.1.0"
     CDS             225..554
                     /gene="Pate7"
                     /gene_synonym="Gm17727; Pate-e"
                     /note="prostate and testis expressed E"
                     /codon_start=1
                     /product="prostate and testis expressed 7 precursor"
                     /protein_id="NP_001161145.1"
                     /db_xref="CCDS:CCDS52759.1"
                     /db_xref="GeneID:100312986"
                     /db_xref="MGI:MGI:4937361"
                     /translation="MGKVQELSIVLLLCMQTALALMCRECKSYSHQKCIHEMRTCTAK
                     DGESCLTVRLWISPSSVHTPNDAYSRCQENCTTDEYYYGDYTILIKCCKKFDFCNDIA
                     VPSDEWS"
     exon            277..405
                     /gene="Pate7"
                     /gene_synonym="Gm17727; Pate-e"
                     /inference="alignment:Splign:2.1.0"
     exon            406..643
                     /gene="Pate7"
                     /gene_synonym="Gm17727; Pate-e"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caatattata tctgaagagg aacaagagaa aaattcgtca cagaagaaag atctggaaaa
       61 ttgccaggtt atcatgactt agattggcat ctagttttgc ctttcatgtt catattggcc
      121 aataaagaga gttataaaat agttggcgac ttatcagcct gtgctagcct atcatctagt
      181 tccatttctt tccaacacct gctacaagag ttagcaaatc ctcaatggga aaagtacagg
      241 agctgagcat cgttctgcta ctctgtatgc aaactgcttt agctctcatg tgtagagaat
      301 gtaaatccta ttcacatcag aaatgtatac acgaaatgag aacatgcact gccaaagatg
      361 gtgaatcttg tctgactgtg agattgtgga tttcaccttc cagtgtacat acaccaaatg
      421 atgcatactc tagatgccag gaaaattgta caacagatga atattactat ggtgattata
      481 caatattgat aaaatgttgt aagaaatttg acttttgcaa tgatattgct gtgccaagtg
      541 atgaatggtc ctgaagaaca ttcagattat cttatggctt cgtccagtct tcctcatctt
      601 atttttttca aataaattca aataaatgtt ttttctaccc tgc
//
