LOCUS       NM_029863               1135 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus prostate and testis expressed 5 (Pate5), mRNA.
ACCESSION   NM_029863 XM_134713 XM_915244
VERSION     NM_029863.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S and
            Swamynathan SK.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Levitin F, Weiss M, Hahn Y, Stern O, Papke RL, Matusik R, Nandana
            SR, Ziv R, Pichinuk E, Salame S, Bera T, Vincent J, Lee B, Pastan I
            and Wreschner DH.
  TITLE     PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR
            proteins that are expressed in reproductive and neuron-rich tissues
            and possess neuromodulatory activity
  JOURNAL   J Biol Chem 283 (24), 16928-16939 (2008)
   PUBMED   18387948
REFERENCE   3  (bases 1 to 1135)
  AUTHORS   Kaplan N, Morpurgo N and Linial M.
  TITLE     Novel families of toxin-like peptides in insects and mammals: a
            computational approach
  JOURNAL   J Mol Biol 369 (2), 553-566 (2007)
   PUBMED   17433819
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113081.8.
            
            On or before Nov 6, 2009 this sequence version replaced
            XM_915244.2, XM_134713.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK020329.1, BY721139.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-156               AC113081.8         2240-2395
            157-285             AC113081.8         6933-7061
            286-1135            AC113081.8         7212-8061
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 20.48 cM"
     gene            1..1135
                     /gene="Pate5"
                     /gene_synonym="9230110F15Rik; Anlp2; mANLP3; Pate-A;
                     Pate-C"
                     /note="prostate and testis expressed 5"
                     /db_xref="GeneID:77080"
                     /db_xref="MGI:MGI:3839959"
     exon            1..156
                     /gene="Pate5"
                     /gene_synonym="9230110F15Rik; Anlp2; mANLP3; Pate-A;
                     Pate-C"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..443
                     /gene="Pate5"
                     /gene_synonym="9230110F15Rik; Anlp2; mANLP3; Pate-A;
                     Pate-C"
                     /note="D730048I06Rik"
                     /codon_start=1
                     /product="prostate and testis expressed A precursor"
                     /protein_id="NP_084139.1"
                     /db_xref="CCDS:CCDS52760.1"
                     /db_xref="GeneID:77080"
                     /db_xref="MGI:MGI:3839959"
                     /translation="MGKLLLLHFLLMQASFALVFIQVQATVCMVCKSFKSGHCLVGKN
                     NCTTRYKPGCRTRNYFLFSHTGKWVHNHTELDCDKACMAENMYLGALKISTFCCKGED
                     FCNKYHGQVVNKNIY"
     exon            157..285
                     /gene="Pate5"
                     /gene_synonym="9230110F15Rik; Anlp2; mANLP3; Pate-A;
                     Pate-C"
                     /inference="alignment:Splign:2.1.0"
     exon            286..1135
                     /gene="Pate5"
                     /gene_synonym="9230110F15Rik; Anlp2; mANLP3; Pate-A;
                     Pate-C"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaatctgta acctgctctc atctacactg accgtcctga gcacttgcta ccagctgctc
       61 tcctgtgtcc tctgatatcc cagactgaga tgggcaagct cctgctccta cactttctgt
      121 tgatgcaggc atcttttgct cttgtgttca tccaagtcca agctacagtg tgcatggtct
      181 gcaagtcttt taagagtgga cattgtttgg taggcaagaa caactgcact acaagatata
      241 agcctggatg cagaaccagg aattacttcc tattctcaca cacaggcaag tgggtccaca
      301 atcacaccga attggactgt gataaggcat gtatggctga aaacatgtat cttggagcct
      361 tgaagatatc taccttttgt tgcaaaggtg aagatttctg taataaatat catggccaag
      421 tagtgaataa gaatatttac taactaccaa ttcattcagc aatggcactg tgtcccagtt
      481 ttccatttcc tcttcctggc atttctcaac aattccctct gtatgtttaa catgaagtga
      541 atgtccacac taactatcag ttgtgctgag aaaaagaaag atgtaagaaa tagatgaaac
      601 ataaaagtga tatataattg taacctactg gctattcaaa aaaggaagga agggtcatgc
      661 attcaaagtt tatgaactgt tctttgcatt tggctagaga agctcaccat tctatgatga
      721 tgctcaactt tgaaaggtct aatttgataa atgatgtcta tttttcatca gtaatatatg
      781 ataatacata atacataaaa atgtattatg aaatacatat gtaatctttt gtaggaattc
      841 atattgggtg tcaactgcct tttgggtcac agagaaaata tcacaaatgc atgatttgat
      901 ttagaatacc ttagatatta ataaaattca ctctaccagg aaatcttccc tgttctatcc
      961 gtcatagcaa gagcaagagg agccataaat ctatttgcca agattcaata gaaaaaagta
     1021 ggtgatcaaa tgtcctcact tgtgatcaag gtctcaaata cctatgtggc tgttctagta
     1081 taaagtccta gctctggttg taccccaagt tgaggaaaga taagaagcac gtagc
//
