LOCUS       NM_001378222            1694 bp    mRNA    linear   ROD 12-OCT-2024
DEFINITION  Mus musculus prostate and testis expressed 13 (Pate13), transcript
            variant 1, mRNA.
ACCESSION   NM_001378222 XM_006510720
VERSION     NM_001378222.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Loughner,C.L., Bruford,E.A., McAndrews,M.S., Delp,E.E.,
            Swamynathan,S. and Swamynathan,S.K.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC157512.3.
            
            On Feb 3, 2020 this sequence version replaced XM_006510720.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.255932.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-71                AC157512.3         131065-131135
            72-95               AC157512.3         131247-131270
            96-236              AC157512.3         131568-131708
            237-1694            AC157512.3         131981-133438
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 20.52 cM"
     gene            1..1694
                     /gene="Pate13"
                     /gene_synonym="9230113P08Rik"
                     /note="prostate and testis expressed 13"
                     /db_xref="GeneID:77908"
                     /db_xref="MGI:MGI:1925158"
     exon            1..71
                     /gene="Pate13"
                     /gene_synonym="9230113P08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..433
                     /gene="Pate13"
                     /gene_synonym="9230113P08Rik"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; prostate and testis expressed protein X;
                     prostate and testis expressed protein 13"
                     /codon_start=1
                     /product="prostate and testis expressed protein 13 isoform
                     1 precursor"
                     /protein_id="NP_001365151.1"
                     /db_xref="GeneID:77908"
                     /db_xref="MGI:MGI:1925158"
                     /translation="MFQKLLLSVFIILLMDVGERVLTFNLLRHCNLCSHYDGFKCRNG
                     MKSCWKFDLWTQNRTCTTENYYYYDRFTGLYLFRYAKLNCKPCAPGMYQMFHDLLRET
                     FCCIDRNYCNDGTANLDTSSILIEDMNQKKELNDD"
     exon            72..95
                     /gene="Pate13"
                     /gene_synonym="9230113P08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            96..236
                     /gene="Pate13"
                     /gene_synonym="9230113P08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            237..1694
                     /gene="Pate13"
                     /gene_synonym="9230113P08Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagaagga ggcccaatta tgttccagaa gcttctgctg agtgttttca taattctcct
       61 tatggatgta ggagaaagag tgctgacatt taacttgctt agacattgta atctgtgttc
      121 gcattatgat gggtttaaat gccgcaatgg catgaaatca tgctggaagt ttgacttatg
      181 gacacaaaac aggacttgta ccacagaaaa ctattattat tatgatcgtt tcacagggtt
      241 ataccttttt cgttatgcca aacttaattg taaaccctgt gcacctggaa tgtatcaaat
      301 gttccacgac ctgctgagag aaacattttg ctgtattgac aggaactact gtaatgatgg
      361 cactgctaac ttggatacct catcaatact tatagaggat atgaatcaaa agaaagagtt
      421 gaacgatgat tgaaataatg aggatttaaa tacctcatgt gcctatattc ttgacaatta
      481 taaaacccag gccccatact cctctctatg tcagtaaatg ttcccatgca aacccagtct
      541 tttttatttc cacatttcaa ataataagaa agagaaaact cacaagtaaa aacaaaacaa
      601 aacaaaacaa atcaaaaaac aaaaacaaaa acaaaacaaa acaaaaaaaa cctcagttct
      661 gtctctggtg tatgttctag ttctggttac tgcctactta gcttcattta tgcttatgtt
      721 ctgatgctca actgtaaaat aaacattgca aaaagggaca tttttctgat agatcttcat
      781 gttgaggacc aaggaaatca gcctacatag aaacaggtcc aaggaataat atttccagag
      841 gaatgactgg catagggtaa aagatgtaga gggagggttt gtgttactca gagctggaaa
      901 gacaatgaaa agttagaagg ctttctaaaa gttaaattca aagaatagtc agtatatttg
      961 atgaagttct aatgcctacc accatttggg ggaaatcatc tggccatagc tattcctgta
     1021 cactcacctc ttggccatgg tatttctatc cactttacta tgctctcata gtcaaagaaa
     1081 aacatgtcaa gatgaaaaat atgttgaata caagtcaccc actctaatct gaagaggcaa
     1141 gtgtgaaatg caagtcttca ggatatttta atataatatt gcatttaggg aatcaatgat
     1201 gagatgtagg ttataactat caacatagct ttgtaacaga aaatgtaatg gtcagaaaga
     1261 ctttttgaaa actcctgtaa tttggaaaca taattaacca tttacaaaga tttatcagcc
     1321 actgacttta aatttccttt gttagcatgt taactctccc acattttaga ttctaaatac
     1381 ctaactatat tttaaccatg taatcacata tacaaatcca atattatctc agatatagca
     1441 gaagtatccc tctgtaattt aatcattgtg gtttcttatt agtatctacc aagttatatt
     1501 tatgaaagta gaataaaatc tttagatctc gaacttattt tcgaaacact tgaagtataa
     1561 ttaaggccgt atttgcccaa ctataataat aataataata ataatataga aattagaatt
     1621 taacttcatg tcatgtggga aatatggaga taatccttca tttggatttg aataattttt
     1681 taatttctta attt
//
