LOCUS       NM_001199953             601 bp    mRNA    linear   ROD 04-OCT-2022
DEFINITION  Mus musculus prostate and testis expressed 1 (Pate1), mRNA.
ACCESSION   NM_001199953
VERSION     NM_001199953.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Noda T, Sakurai N, Nozawa K, Kobayashi S, Devlin DJ, Matzuk MM and
            Ikawa M.
  TITLE     Nine genes abundantly expressed in the epididymis are not essential
            for male fecundity in mice
  JOURNAL   Andrology 7 (5), 644-653 (2019)
   PUBMED   30927342
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S and
            Swamynathan SK.
  TITLE     Organization, evolution and functions of the human and mouse
            Ly6/uPAR family genes
  JOURNAL   Hum Genomics 10, 10 (2016)
   PUBMED   27098205
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 601)
  AUTHORS   Turunen HT, Sipila P, Pujianto DA, Damdimopoulos AE, Bjorkgren I,
            Huhtaniemi I and Poutanen M.
  TITLE     Members of the murine Pate family are predominantly expressed in
            the epididymis in a segment-specific fashion and regulated by
            androgens and other testicular factors
  JOURNAL   Reprod Biol Endocrinol 9 (1), 128 (2011)
   PUBMED   21942998
  REMARK    GeneRIF: Characterization of a gene cluster consisting of at least
            14 expressed Pate gene members, including Acrv1, Sslp1 and a
            previously uncharacterized gene which we named Pate-X.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 601)
  AUTHORS   Levitin F, Weiss M, Hahn Y, Stern O, Papke RL, Matusik R, Nandana
            SR, Ziv R, Pichinuk E, Salame S, Bera T, Vincent J, Lee B, Pastan I
            and Wreschner DH.
  TITLE     PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR
            proteins that are expressed in reproductive and neuron-rich tissues
            and possess neuromodulatory activity
  JOURNAL   J Biol Chem 283 (24), 16928-16939 (2008)
   PUBMED   18387948
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113081.8.
            
            On Oct 4, 2022 this sequence version replaced NM_001199953.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849381
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-71                AC113081.8         159000-159070
            72-107              AC113081.8         159362-159397
            108-140             AC113081.8         160024-160056
            141-263             AC113081.8         160304-160426
            264-601             AC113081.8         161167-161504
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 20.39 cM"
     gene            1..601
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /note="prostate and testis expressed 1"
                     /db_xref="GeneID:100312987"
                     /db_xref="MGI:MGI:4936886"
     exon            1..71
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..397
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /codon_start=1
                     /product="prostate and testis expressed protein 1
                     precursor"
                     /protein_id="NP_001186882.1"
                     /db_xref="CCDS:CCDS57669.1"
                     /db_xref="GeneID:100312987"
                     /db_xref="MGI:MGI:4936886"
                     /translation="MCKSQLLRCLIFLCYLKVFSGSLPGDANKPGKVLVHENNNVVEI
                     VQCRMCHLKFPGENCTRGRGICTATAEEACMAGKVFKRDGTIWLNFMGCLKNCANVKK
                     IKWGPYLVDFRCCRGQDMCNENF"
     exon            72..107
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /inference="alignment:Splign:2.1.0"
     exon            108..140
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /inference="alignment:Splign:2.1.0"
     exon            141..263
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /inference="alignment:Splign:2.1.0"
     exon            264..601
                     /gene="Pate1"
                     /gene_synonym="Gm17252; Pate"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaacctttct gcctccaaaa tgtgcaagtc ccaattactg agatgcctca tctttctgtg
       61 ctatttgaag gttttctctg ggtcacttcc aggtgatgct aacaaacctg gtaaagtact
      121 ggttcatgaa aataacaatg ttgtggaaat tgtgcagtgt aggatgtgcc acctcaagtt
      181 ccctggagaa aattgcacca gaggaagagg aatatgtact gcaacagcag aagaggcctg
      241 tatggctggg aaagtcttca aaagggatgg taccatatgg ttaaatttca tgggctgctt
      301 aaagaactgt gctaatgtga aaaaaataaa atggggcccc tatctggtgg acttcagatg
      361 ctgccggggc caagacatgt gcaatgaaaa tttttaaatg cttctatcta tctgtgctcc
      421 aagatgtggg tgatgggatg gcctctccac aatgacctcc tgaggacaag cctgcaaaaa
      481 aggtctgcaa acgcgtgatt ctgccttcta catgtcagag ggaaagcacc ctttttctaa
      541 agtcccttcc tgttttgaaa ccaataaaaa gtgaaaaaat aaaacttttt taccaatatc
      601 a
//
