LOCUS       XM_030246613            4214 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly (A) polymerase alpha (Papola),
            transcript variant X12, mRNA.
ACCESSION   XM_030246613
VERSION     XM_030246613.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4214
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..4214
                     /gene="Papola"
                     /gene_synonym="Pap; PapIII; Plap"
                     /note="poly (A) polymerase alpha; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 160 ESTs, 2330 long SRA reads, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 43 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18789"
                     /db_xref="MGI:MGI:109301"
     CDS             1050..2363
                     /gene="Papola"
                     /gene_synonym="Pap; PapIII; Plap"
                     /codon_start=1
                     /product="poly(A) polymerase alpha isoform X12"
                     /protein_id="XP_030102473.1"
                     /db_xref="GeneID:18789"
                     /db_xref="MGI:MGI:109301"
                     /translation="MVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLA
                     ITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGS
                     LEKNEFITLAHVNPQSFPAPKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQS
                     FTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALND
                     SSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSV
                     PQANSSESPGGPSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPSPRPSGNTATKV
                     PNPIVGVKRTSSPNKEESPKKTKTEEDETSEDANCLALSGHDKTETKEQVDLETSAVQ
                     SETVPASASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR"
ORIGIN      
        1 gtcagcggtt ctagaacgtt gctgtggtag cgctcgggcg ccatgttagg acgaagggga
       61 aggaggagaa gcgcttaaag cggcggggca cgggtgcagg actgggttgg ccccggggct
      121 gaggtaggct gccgtccttc ccgcctcggt ggatcatgcc caggacggca gcggtcgcgg
      181 gggggaagtg actgggcggt gccggcgccg gagacgatgc cgtttccagt tacaacgcag
      241 ggatcacaac aaacgcagcc accacagagg cactatggca ttacctctcc tatcagctta
      301 gcggccccca aggagactga ctgcctactc acacagaagc tcatcgagac gctgaagccc
      361 tttggggttt ttgaagaaga agaggaactg cagcgcagga ttttaatttt gggaaaatta
      421 aataacctgg tgaaagaatg gattcgagaa atcagtgaaa gcaagaatct cccacaatct
      481 gtaattgaaa atgttggagg gaagattttt acatttggat cttacagact aggagtccac
      541 acgaaaggtg ctgatattga tgcgttgtgt gttgcaccaa gacatgttga tcgaagtgac
      601 tttttcacct cattctatga taaattgaaa ttacaagaag aagtgaaaga tttaagagct
      661 gttgaagagg catttgtacc agttatcaaa ctctgttttg atggaataga gattgatatt
      721 ttgtttgcaa gattagcact gcagactatt ccagaagatt tggacctacg agatgacagt
      781 ctgcttaaaa acctagatat aagatgcata agaagcctta atggttgcag ggtaaccgat
      841 gaaattttac atctagtacc aaacattgac aacttcaggt taactctgag agccatcaaa
      901 ctgtgggcca aacggcacaa catctattcc aatatattag gtttcctcgg tggtgtttcc
      961 tgggctatgc tagtagcaag aacttgccag ctttatccaa atgcaatagc atcaactctt
     1021 gtacataaat ttttcttggt attttctaaa tggtaaaccc cagtgatagg taccatctta
     1081 tgcctataat tacaccagca tacccacagc agaactccac gtacaatgtg tccgtttcaa
     1141 cacggatggt catggttgag gagtttaaac aaggtcttgc tatcacagat gaaattttgc
     1201 tgagtaaggc agagtggtcc aaactttttg aagctccaaa cttctttcag aagtacaagc
     1261 attatattgt acttctagca agtgcgccca cggaaaagca gcgtctggaa tgggtgggct
     1321 tggtggaatc aaaaatccgc atcctggttg gaagcttgga gaagaatgag tttattacac
     1381 tggctcatgt gaatccccag tcatttccag cccccaaaga aagtcctgac agggaagaat
     1441 ttcgcacaat gtgggtgatt gggttagtgt ttaaaaaaac tgaaaactct gaaaatctca
     1501 gtgtcgacct cacctatgat atccagtctt tcacagacac agtttatagg caagcaataa
     1561 acagcaaaat gtttgagttg gatatgaaga ttgcagcaat gcatgtgaag agaaagcaac
     1621 tccatcagct gctgcctagt cacgtgcttc agaagaggaa gaagcattca acagaaggag
     1681 tcaagttaac agctctgaat gacagcagcc ttgacttgtc tatggacagt gataacagca
     1741 tgtctgtgcc ttcacccacc agtgctatga agaccagtcc attgaatagt tctggcagct
     1801 cccagggcag aaacagtcct gctccagctg tgaccgcagc atctgtgacc agcatccagg
     1861 cttctgaggt ttctgtaccg caagcaaatt ccagtgaaag cccagggggt ccatcgagcg
     1921 aaagcattcc tcaaactgcc acacagccag ccatttctcc accaccaaag cctacagtct
     1981 ccagagttgt ctcctcaaca cgactggtaa acccatcgcc tagaccttca ggaaacacag
     2041 caacaaaagt ccctaatcct atagtaggag tcaagagaac gtcctcaccc aataaagaag
     2101 aaagtcctaa gaaaaccaaa acagaagagg atgaaacaag tgaagatgct aactgtcttg
     2161 ctttgagtgg acatgataaa acagagacaa aggaacaagt tgatctggag acaagtgcgg
     2221 ttcaatcaga aactgttccg gcatcggctt ctctgttggc ctctcagaaa acatccagta
     2281 cagacctttc tgatatccct gctctccctg caaatcctat tcctgttatc aagaattcaa
     2341 taaaactgag actgaatcgg taaaaccacc tcagggtcca taaacagtat ctgccaactc
     2401 aacccgttgt ctccagatgc ttaaacaaag gaaagaaaga aagaaaggaa aagaggagat
     2461 tggagggaca agactagacc tgactgacag tgggtttagc tgtttggtgg cctccctgcc
     2521 ttgggctcat gagcacttga tcagaagtcc aggttagtat gcgaagccag gagtgctatt
     2581 attactgtgt tagcgacagc tgcattaact actcagaaaa attactgcct ttaagaagga
     2641 aacaaaacaa aaccctcgag ctatgtttgt atccataact gacatccgga tcgcgcctct
     2701 gtgtgctgca ttgtttggaa aactgcaata caagctggca gaagaactcc tcattctgat
     2761 gatgcacttt tatgtatttt tttttaatta gaaagtagaa ctaattttag attttcagct
     2821 taatggattt tcaatttttt ttccccaaag aattttcttt acaattagtc tttaaattgg
     2881 atacgttgtg cattggtgta ccattctgtc ccagaaaggg caggaggaca ccgagctcag
     2941 cccagtcctt acgggcagct gtagccctta gggtgaattg tcaatgctaa ggtatacttt
     3001 ggacactgaa agaagaatta ggcgatactt ggttttgatg aggttatgat taagcagtat
     3061 atattccttt tatttataga gttgttttat agtgcataca aatcagcatt cggccaacaa
     3121 gtgtggtctt tgagctttcg caagctctgt tcttttgcct tcagtctgtt agtcttcaga
     3181 aagacagtgc tcccccaccc ccttttattt tattttttgc ctttcttttt tcccctttgc
     3241 ttgtatgcac aaggtaaggc ttatttcaca gaaaccagaa tgccagtatt ttcctaagcc
     3301 atgacatgta accttgaccc tgtggctgcg tgacacagac actaactttg gtcccatggc
     3361 tagaacttga gagtgactga agccatacct gtgaagcatc cccggaggcg gccctttgat
     3421 ctctgcgagg acttttgtac actccacaca actcctgttc ctgtcttaga caaattgatt
     3481 ttcattttta aaagtgggca aaaggcattt tcttccagat ttttaaacta atttttattt
     3541 ttaaccagtt tatcaaaatt tgtcagtgaa ttttacatac aaaaacattt taaaaatcat
     3601 ttctagtaag cacttgacat ttagtcagct ttccactttt gaattttttt ttttgttcta
     3661 tcaaaaatta gaaatcttct ttaaagacaa tgatttctca taattaagta gcagaattct
     3721 cgtccatctt gtgacatctg acgggtgcca gatgttgata aagttactct ttgttaatct
     3781 gggtaaaaca gacctgtagc agcagatctt tgtatgagca tggtttttga atccttcatt
     3841 tcgctgcatt ctatcacacg tttgtgcatt ttcatgttac actgcaatta cttaaactct
     3901 cccctgtcct tccaaattaa tttccaaagt tggagtatag tctttcccct gaagctatgc
     3961 attaattaag gctttcttta ccacttacat tgtttatata cagtgttcta ctctccacct
     4021 cttgctctgc agtcaccttg cccttcctcc caccatttga gtaaagaaga cggtccgcta
     4081 acaggtgaca tgtactggtg tctgtgtgtg tagcttcaga gttagattga catcaccagg
     4141 cacagattta gtcttgtcgt tttgtttaca cattggggaa aaattcagtt taataaacgt
     4201 tccatgtaac tgca
//
