LOCUS       XM_036162860            2321 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus palmdelphin (Palmd), transcript variant X2,
            mRNA.
ACCESSION   XM_036162860
VERSION     XM_036162860.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..2321
                     /gene="Palmd"
                     /gene_synonym="4631423C22Rik; PALML"
                     /note="palmdelphin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 33 ESTs, 85 long
                     SRA reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 10 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:114301"
                     /db_xref="MGI:MGI:2148896"
     CDS             863..1996
                     /gene="Palmd"
                     /gene_synonym="4631423C22Rik; PALML"
                     /codon_start=1
                     /product="palmdelphin isoform X1"
                     /protein_id="XP_036018753.1"
                     /db_xref="GeneID:114301"
                     /db_xref="MGI:MGI:2148896"
                     /translation="MEIKVEKDLKTGESVVLSSIPLPSDDFKSTGIKVYEDRQKSVYA
                     VSSNQNTTYNGTDGLAPVEVEDLLRQASERNSKSPTEYHEPVYANPFCRPVTPQRERV
                     ISPGPNFQERIMMKTNGLGNHANESAHNMTDGLSERRSNGPTHTSPTRPTPQPRSMVQ
                     QVEEMVHTQQKRMASPWEESSNRQNEHEVSPRMELSPSRASPGKSGPQCSSPTCQEET
                     EDVRYNIVHSLPSDVDDTEPVTMIFMGYQQADDNEEEKKLLTGYDGVIHAELVVIDDE
                     AEDNEGQTERPSYHPVAPYSQVYQPPKPTPLPRKRAEVRPYENTNHKSPHKNSISLKE
                     QEERLGSPARHSPLDVPVAGDGTEDPSLTALRIRMAKLGKKVI"
ORIGIN      
        1 ttaaacacac acaggctcac aggaaaacct gggctgcccg gaccccgaca ctcagcacgg
       61 cagctccctg cgccactcct ggaaaataat gacttgggta aggaacagtt aataagaaaa
      121 tgtgtctcgc taaccgtgca cagcacaaca aagagctggc agcccctgaa ggaaaagggc
      181 ttgtgcggct gccgttcaaa cttgtcagtc aactcgtgcc agcagcctca gcgtctgcct
      241 ccccagtgca ccctcattac atgtgtctgt ctggcctcat ctgtgcatgg gctctgagcc
      301 gctccgctcc tgacagttcg gaattctctt cctctctccc tgctgcaaag agcggatttc
      361 tctccgtgtc tcttctgtca tctccagctc ccctctccaa ggacgcacct tgatttatgg
      421 tagctttgga cttccttcag cgtctgcctg tccttgactt ctagaatgga agaagctgag
      481 ctggtgaagg gaagactcca ggccatcact gacaaaagaa agatacagga agaaatctca
      541 cagaagcgtc tgaaaataga ggaagaaaaa ttgaaacacc aacatctgaa ggcttgagaa
      601 agagatccaa gatcttgaaa aggctgaact gcaaatctca gccaacgaag aggcaattct
      661 gaagaagcta aagtcgatcg agaagaccac agaagacata ataagatccg tgaaggtgga
      721 aaaggaagaa aacccagaag agtcaatcga ggacatctat gctaatatcc ctgaccttcc
      781 aagttcctac ataccttccc gattaagaaa ggaaagaaac gaaggaccag atgacgaaca
      841 aaacagaaaa gctttgtatg ccatggaaat taaagttgaa aaagatttga agactggaga
      901 gagcgtagtt ctgtcttcaa taccgctgcc atctgatgac tttaaaagca cagggataaa
      961 agtgtatgag gaccggcaga aatcagtcta tgctgttagc tccaatcaga acacaaccta
     1021 caatggcacc gacggcctcg cacctgtcga agtggaggat ctcctaagac aagcctcaga
     1081 gaggaactct aaatcgccca cagagtacca tgagccagtg tacgccaatc cgttttgcag
     1141 gcctgtgacc ccacagagag aaagagtcat aagccctgga ccaaattttc aagaaaggat
     1201 aatgatgaaa acgaacggac tgggcaacca tgcaaatgaa tctgcgcaca atatgaccga
     1261 cgggctctca gagaggagaa gcaacggtcc cactcacacc agtcccactc ggccaacacc
     1321 tcagccccga tcaatggttc agcaagtgga agagatggtc cacacccaac aaaagaggat
     1381 ggcaagccct tgggaagaat ccagcaacag gcaaaacgaa cacgaagttt ctccaaggat
     1441 ggaactgagc cccagcagag caagccctgg gaaatcggga ccccagtgtt cttcacccac
     1501 ttgccaggag gagacagaag atgtcagata taacatcgtt cattccctgc cttctgatgt
     1561 ggatgacaca gaacctgtaa caatgatttt catggggtat cagcaggcag atgataatga
     1621 ggaagaaaag aagcttttga caggctacga cggggtcatc cacgctgagc tcgttgtgat
     1681 tgatgacgag gcggaggata atgaaggaca aaccgagagg ccatcctacc atcccgtagc
     1741 tccctacagt caggtttacc agccacccaa accaacccca cttcctagaa agagagcgga
     1801 agttaggccg tatgaaaaca caaaccataa atctcctcac aaaaattcca tctctctgaa
     1861 agagcaagag gaacgcttag gcagccctgc ccggcactct cccctggatg tcccagtagc
     1921 tggagacggg actgaggatc cttccttaac agctttaaga ataagaatgg ccaagctggg
     1981 gaaaaaggtg atctgagagc cgtggtgccc acctgaataa cctctgaagg agaagccacg
     2041 aaatgcctga aaacttctct tctgaattct tttatttctt gtccctaaag tccaaaacta
     2101 tataattata cccatagtaa gtcacataaa taaatattag tcattattta ggggggaatc
     2161 ccccctcaaa aaaaactggg acaacaaatg ctaacttttc cagttacttg atatgactca
     2221 gtggggccgg gggaaccagt atatttttat tgtattgata ccaaagcatt tctaataaga
     2281 gcttgttgaa tttaagaata aagttattta aaataccttg a
//
