LOCUS       XM_030252256            2006 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus protein kinase C and casein kinase
            substrate in neurons 3 (Pacsin3), transcript variant X5, mRNA.
ACCESSION   XM_030252256
VERSION     XM_030252256.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030252256.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2006
                     /gene="Pacsin3"
                     /gene_synonym="4921507A02Rik; 6330413E15Rik"
                     /note="protein kinase C and casein kinase substrate in
                     neurons 3; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 66 ESTs, 162 long SRA
                     reads, 15 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:80708"
                     /db_xref="MGI:MGI:1891410"
     CDS             359..1633
                     /gene="Pacsin3"
                     /gene_synonym="4921507A02Rik; 6330413E15Rik"
                     /codon_start=1
                     /product="protein kinase C and casein kinase II substrate
                     protein 3 isoform X1"
                     /protein_id="XP_030108116.1"
                     /db_xref="GeneID:80708"
                     /db_xref="MGI:MGI:1891410"
                     /translation="MAPEEDAGGEVLGGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQ
                     ERARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAFFTAAERLSELHLEVREKL
                     HGPDSERVRTWQRGAFHRPVLGGFRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHTA
                     RKDEKTAQTRESHAKADSSMSQEQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTP
                     RYMEDMEQAFESCQAAERQRLLFFKDVLLTLHQHLDLSSSDKFHELHRDLQQSIEAAS
                     DEEDLRWWRSTHGPGMAMNWPQFEEWSLDTQRAISRKEKGGRSPDEVTLTSIVPTRDG
                     TAPPPQSPSSPGSGQDEDWSDEESPRKVATGVRVRALYDYAGQEADELSFRAGEELLK
                     MSEEDEQGWCQGQLQSGRIGLYPANYVECVGA"
ORIGIN      
        1 aacccggagc gaactgtgac tccaggaccc ctgagcacca gaggcctggg accccgctgg
       61 cccgcgttcc ctcctgtctc tcgggtcagg ggcaccgctg cggggtcacc cggctcagga
      121 gagagcagga ggggcggaga agccgagcag gtggagatta ggtcagcctc agaacattct
      181 tggaccgctc cagtgaatat aaataacaga cccacaagct ctgaaatccc gagaggctgg
      241 gggtggagca gtgaagaagg gatctattta gggtggggtg gcatcgagac gattcggaaa
      301 aagtctacat tgaactagga gcaccacatc tgccaccatt ccgtgctgca gggataccat
      361 ggctccagag gaggacgccg gaggggaggt cctagggggc agtttctggg aggctggcaa
      421 ctacagacgg acggtgcaga gggttgagga tgggcacagg ctgtgtgggg acctggttag
      481 ctgcttccaa gaacgtgccc gcattgagaa ggcctacgcc cagcagctgg ctgactgggc
      541 ccgcaagtgg aggggtgctg tggagaaggg cccacagtac ggcaccctgg agaaggcctg
      601 gcatgccttc ttcactgcgg ctgagaggct gagcgagctg cacttggagg tgagggagaa
      661 gttgcacggt ccagacagcg agcgagtgcg gacctggcag cgaggggctt tccaccggcc
      721 agtgctgggg ggctttcggg aaagccgggc tgcagaggat ggtttccgta aagctcagaa
      781 gccctggcta aagaggctga aggaggttga ggcttctaag aagagctacc acacagcccg
      841 caaggatgag aagacagccc agacccggga gagccacgcg aaggcagaca gctccatgtc
      901 ccaggagcag cttcgaaaat tacaggagcg ggtgggccgc tgcaccaagg aggcagagaa
      961 gatgaaaacc cagtatgagc agaccctggc cgagctaaat cgctacaccc cacgctacat
     1021 ggaggacatg gagcaggctt ttgagagctg ccaggctgct gagcgccagc ggcttctctt
     1081 cttcaaggat gtcttgctca ccctgcatca acacctcgac ctctccagta gcgacaagtt
     1141 ccatgaactc catcgagacc tgcagcagag cattgaggct gccagtgatg aagaggatct
     1201 gcgctggtgg cggagcacac acgggcctgg catggccatg aactggccac agtttgagga
     1261 atggtcgtta gacacacaga gagccatcag ccgcaaggag aagggtggcc ggagcccaga
     1321 tgaggttact ctgaccagca ttgtaccgac aagagatggc accgcacccc caccccagtc
     1381 cccatcgtcc ccgggtagcg ggcaggacga ggactggtca gatgaggaga gtccccggaa
     1441 agttgccact ggggtgaggg tacgggcgct ttatgactat gctggccagg aggctgatga
     1501 gctgagcttc cgagcagggg aagagttgct gaagatgagc gaggaggatg agcagggctg
     1561 gtgccagggc cagctgcaga gtggccgcat tggtctgtac cctgccaatt acgtagaatg
     1621 tgtgggcgcc tgagtgccct gacagcccta ccaaggcgtc tctctgacct gggccagagc
     1681 ttaacccttc ctggactgct ggacctgaag gccctgaacc atgtgctgct gctgtctctc
     1741 ttttcccaca ggaggaagtc tcagggccca tgaagggcag gggtctgtgt ctagagttgg
     1801 aggttggaat gatggagggt cgagaggtgc ccgagcctcc tcgggaacat ttgggtcatc
     1861 ccagagtggg aggatccagc tcctaaactg tttaggagtt cctggggtga ggttggggag
     1921 aatgtagttt gaggctggca gcaccttctt ttgtgacttg tagtgtgcat taaatttgat
     1981 taagaataaa aaccccatca agtgtt
//
