LOCUS       NM_028671                745 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus PABIR family member 3 (Pabir3), transcript variant 1,
            mRNA.
ACCESSION   NM_028671
VERSION     NM_028671.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 745)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015916.1 and AK015288.1.
            
            On Dec 30, 2017 this sequence version replaced NM_028671.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015916.1, SRR5189685.228208.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-484               AK015916.1         2-485
            485-641             AK015288.1         476-632
            642-745             AK015916.1         643-746
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 29.45 cM"
     gene            1..745
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /note="PABIR family member 3"
                     /db_xref="GeneID:73866"
                     /db_xref="MGI:MGI:1921116"
     exon            1..71
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     exon            72..273
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..631
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /note="family with sequence similarity 122, member C"
                     /codon_start=1
                     /product="protein FAM122C"
                     /protein_id="NP_082947.1"
                     /db_xref="CCDS:CCDS40973.1"
                     /db_xref="GeneID:73866"
                     /db_xref="MGI:MGI:1921116"
                     /translation="MSLNEEEPDTLQNFQLGRGFILNTDVIQETMEVDLGLVPASSSV
                     DISYVRRSNSIPSVNGFGDNSQGFQVGPTRMRRNGSPFLNQHGLLFLPSRSRTSANRI
                     FQIKQEEGMDMAIREAMHERDMHTAMQISRSTEQCLNLNDNNTVKSSTMRNINPNPFS
                     PVASLPKRPRKNPHHDHLTF"
     exon            274..352
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     exon            353..409
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     exon            410..453
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     exon            454..508
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     exon            509..601
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
     exon            602..745
                     /gene="Pabir3"
                     /gene_synonym="4930432H15Rik; 4930527G05Rik; Fam122c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacagatgag accattggca gatgggcagc agactgggac ttaggaagaa caagatagtg
       61 taagttttaa gcattgtacc accaagacat gtctttaaat gaagaagagc cagatacgct
      121 ccaaaatttc caacttggca gaggttttat cctcaacaca gatgtgatac aggagactat
      181 ggaagtggat ttaggtctgg taccagcttc cagctctgta gacatcagct acgttagaag
      241 atccaacagc atcccttcgg tcaatggatt tggtgataat tcacagggat tccaagttgg
      301 ccccacaaga atgagaagga acggctcccc ctttctgaat cagcatggat tgctgtttct
      361 accttcccgc agtcgtacat ctgccaaccg gattttccaa atcaaacagg aagaagggat
      421 ggatatggca attagagaag caatgcatga gagggacatg catactgcaa tgcagataag
      481 tcggagtacg gaacaatgtc taaatctgaa tgacaataac accgtgaagt catccactat
      541 gaggaacatc aatccaaatc cattttcccc agtggcttct ctccccaaaa gacctaggaa
      601 gaatccacac cacgaccatc tgacctttta gctcaagtat cctggaaaca tcaaaaagta
      661 atgatacctt tacattctgg cagatataac ttaaaattgt gttgtaaaat tatctaatat
      721 taaatgctat tcattttttg ttttt
//
