LOCUS       NM_026520               3550 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus PP2A A alpha (PPP2R1A) and B55A (PPP2R2A) interacting
            phosphatase regulator 1 (Pabir1), mRNA.
ACCESSION   NM_026520
VERSION     NM_026520.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Yang,Y.S., Liu,M.H., Yan,Z.W., Chen,G.Q. and Huang,Y.
  TITLE     FAM122A Is Required for Mesendodermal and Cardiac Differentiation
            of Embryonic Stem Cells
  JOURNAL   Stem Cells 41 (4), 354-367 (2023)
   PUBMED   36715298
  REMARK    GeneRIF: FAM122A Is Required for Mesendodermal and Cardiac
            Differentiation of Embryonic Stem Cells.
REFERENCE   2  (bases 1 to 3550)
  AUTHORS   Liu,M.H., Zhang,X.C., Chen,J., Yang,Y.S., Wang,Y.Q., Zheng,J.K.,
            Chen,G.Q. and Huang,Y.
  TITLE     FAM122A is required for hematopoietic stem cell function
  JOURNAL   Leukemia 35 (7), 2130-2134 (2021)
   PUBMED   33262527
REFERENCE   3  (bases 1 to 3550)
  AUTHORS   Ballif,B.A., Villen,J., Beausoleil,S.A., Schwartz,D. and Gygi,S.P.
  TITLE     Phosphoproteomic analysis of the developing mouse brain
  JOURNAL   Mol Cell Proteomics 3 (11), 1093-1101 (2004)
   PUBMED   15345747
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC150898.2.
            
            On Jan 23, 2023 this sequence version replaced NM_026520.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK077654.1, BC028637.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3550              AC150898.2         89182-92731
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 19.53 cM"
     gene            1..3550
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="PP2A A alpha (PPP2R1A) and B55A (PPP2R2A)
                     interacting phosphatase regulator 1"
                     /db_xref="GeneID:68034"
                     /db_xref="MGI:MGI:1915284"
     exon            1..3550
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..954
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="protein FAM122A; PABIR family member 1; family with
                     sequence similarity 122, member A"
                     /codon_start=1
                     /product="P2R1A-PPP2R2A-interacting phosphatase regulator
                     1"
                     /protein_id="NP_080796.1"
                     /db_xref="CCDS:CCDS29712.1"
                     /db_xref="GeneID:68034"
                     /db_xref="MGI:MGI:1915284"
                     /translation="MAQEKMELDLELPAGASPAEGGGPGGGGLRRSNSAPLIHGLSDS
                     SPVFQAEAPSARRNSTTFPSRHGLLLPASPVRMHSSRLHQIKQEEGMDLINRETVHER
                     EVQTAMQISHSWEESFSLSDNDVEKSASPKRIDFIPVSPAPSPTRGIGKQCFSPSLQS
                     FVSSNGLPPSPIPSPTTRFTTRRSQSPINCIRPSVLGPLKRKCEMETDYQPKRFFQGI
                     TNMLSSDVAQLSDPGVCVSSDTLDGNSSSAGSSCNSPAKVSTTTDSPVSPAQAASPFI
                     PVDELSSK"
     regulatory      1244..1249
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="hexamer: AATACA"
     polyA_site      1273
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="major polyA site"
     regulatory      1344..1349
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="hexamer: AGTAAA"
     polyA_site      1370
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
     regulatory      2676..2681
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="hexamer: AATAAA"
     polyA_site      2699
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
     polyA_site      2728
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
     regulatory      2980..2985
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="hexamer: ATTAAA"
     polyA_site      3001
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
     regulatory      3526..3531
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
                     /note="hexamer: TATAAA"
     polyA_site      3550
                     /gene="Pabir1"
                     /gene_synonym="2410124L17Rik; 2900009I07Rik; Fam122a;
                     Gm9849"
ORIGIN      
        1 agattctcga aggcggcggc ggcggcggcg gccttgggcc gcggggaatg ggagtcccag
       61 ggccctgact gagcaccgcc cccgcctccc ggccgcgcca tggctcagga gaagatggag
      121 ctggacctgg agttgcccgc gggcgcgagc ccggcggagg gcggcggccc tggcggcggg
      181 ggcctgcgga ggtctaacag cgcccccctg atccacggcc tcagcgactc gtcgccggtg
      241 ttccaggccg aggcgcccag cgccagacgg aacagcacga cgttcccgag ccgccacggc
      301 ctgctgctcc cggcctcgcc ggtccgaatg cacagcagcc gcctgcacca gatcaaacag
      361 gaggagggca tggacctgat caaccgagag accgttcacg agcgcgaggt gcagaccgca
      421 atgcagataa gccactcctg ggaggaaagt ttcagcctga gtgacaacga cgtggagaaa
      481 tccgcctccc cgaagcgcat cgatttcatt ccggtgtctc cggcaccgtc cccgacccgg
      541 ggaattggga agcagtgttt ctcaccgtcc ttgcaaagtt ttgtgagtag caacggactg
      601 cctccaagtc ccattcccag cccaaccacc cgatttacca cccggagaag ccagagtccc
      661 atcaactgca ttagaccaag tgttcttgga ccattgaaaa gaaaatgtga aatggaaact
      721 gattatcagc caaagagatt tttccagggc atcaccaaca tgctgtcttc tgacgttgca
      781 cagctgtcag accccggtgt gtgcgtatct tccgataccc tggatggaaa cagcagcagt
      841 gccggatctt cctgtaactc accagcgaaa gtcagcacta ccaccgactc tcctgtgtcg
      901 cccgcccaag cagcctcccc ctttattcca gtagatgaac tttcctcaaa gtgactcact
      961 catcttgaat ccccctcccc caatggagag acaaaaaaac aaaaacaaac aaaaaaaaaa
     1021 agaaagaaaa aaatcaagtt agagcaagca ctgaactttg tcgattacgt taaagccgtt
     1081 tcctatttga ctcttccctc tttttggaaa ttcctgaaat gttattctag agaatttcta
     1141 tgtcaggttc ctggggatgc ccttgaattc agtgtagtaa tattttcgga ctttttatca
     1201 ataagtgtgt tgaagcatac attttacgct gctaatatgt ctaaatacat atgttatccc
     1261 ttgatttttt aaataattga gagctctatt tatttatggg attattaagt tctgatgaaa
     1321 atataaatgt tgaatttcag tttagtaaac tgatgtttta aaattccata gttcatggca
     1381 cactaatttt tggtgttttc aatggttgct attttacatc tactgaagaa tttacctact
     1441 tacagcttta aaaagaatgt tagtcatatc agtccattgg ttgtctagtt tacccaggag
     1501 cccttggtat ttaatgtcct aggcagaaag gtggatggga gggaaaaacg acaaaaggag
     1561 aaatagcact tgcagcaaat gttttaaaat tcagtatata aagtaaatat ttacggacat
     1621 tttctaacac ttttcatagt aactctggta aatcacacta atacaagtac agaaatgaca
     1681 agtttctttg tgaaaacatt tttaaccaga aagtgcattc ttttgggtat agtcctaaac
     1741 aagcaggggg acggtgcctt gtagtcttag ctcacatgga gacaggtgaa ggcaaggctc
     1801 ttgctgccat ctcagattta acacttgtga aatgtaaatg tgtgagaagc accgttgagt
     1861 gttggagaat acccagacag acgatactct ctcaatcctt gatagacttg aagctatcca
     1921 gtcacgtctc cattcttaaa attcttgcca atgagaagcc agagcagctc gtggctgctt
     1981 tttttgctct gcccatctgt caccttcatc tttttccctt gctcaggaag gaagcagttg
     2041 tttccttgcc aacaggtact tcccatttcc caccaagcta gggcgtggct agataaaggt
     2101 acctctgact tgggtttcta acagcgtgat acatctctgt agttggagtt atattaacag
     2161 cattggaaat gtcagttaat taaagaccga tgatgatcag tggacagtca catccataaa
     2221 tcatcactta ggttttctct cttttttttt ttgccagggg gtgggggtgg ggaagtttcc
     2281 gagacagggt ttctctgtat agccctggct gtcctggaaa tcattctgta gaccaggctg
     2341 gcctcggact cagaaatcca cctgcctcta cctcccaagt gctgggatta aaggcgtgag
     2401 ccaccaccac cccggcactt aggttttctt acaggtagaa gtatgggctg ctttttcttt
     2461 tacaattaag ataaacaaca aatgcttttt atactatact tctttacaat acttcatctg
     2521 tcctagaaag gtaagacaga ttgaatgaat aacagaccaa aagaaaaagg ttcaaaacaa
     2581 tactttgaga aagacctgac aaaaattcca acttaacttt ttaaagttgc cacctacaga
     2641 ctttaataat gatgtggaat ttttagaact ctgagaataa atggaactgg tcaactcttg
     2701 acagttgcat caggtttctg tgaaatgaca tcaagggtaa gattgtgtct gtgtttaaca
     2761 ttttggggta atagtctgtc tacttgtgct tccatcctga ttgtttcagt ttaaacctac
     2821 atacccagtt tcctttcagg taccttgacc tgcttccagg ggaactttta atagcctcac
     2881 aacaaaatct ccctccatac ttaatgtgtt cctgcaggtc gatggcatcc ttgcctcatt
     2941 tcctaaacta gataccattg gcacatctga tgtcttccaa ttaaatacac ataacccccg
     3001 agctctgtca gtttctgtca gtttttagat cctgctccaa ctcccctgtg tctcgcctct
     3061 cttttggctt gatcttcacc actgctcaac aatgatttta ttacagtata aacttgatat
     3121 ttttttcatt ttcatactca aaaactatat cttttatagt tcttatagtt taggcagccc
     3181 tgtaaggtct ttgttggtct ggttgtaccc taaagttact tcagtcctct cagtacttac
     3241 ctccctcctg ctgcagatac tagactactt gataattctt agagatatat tcttacatgt
     3301 ttacacattt aaaatttgtg tgtatgtgcg cacgcgtgcg agtgtgttgt gtacacatgg
     3361 aggccagaaa acagtttgtg tgagttgatt gtctcctttc acagtgttgg ttccaaggat
     3421 ggaactcagg tggttagtat tggtaccagg aacctaaact taccctttga accaaccctc
     3481 ctcatccccc tttttaatcc acatgaattt ctactgaaaa ctgtgtataa atggattact
     3541 aaatacttaa
//
