LOCUS       NM_025560                824 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus oxidoreductase like domain containing 1 (Oxld1),
            transcript variant 1, mRNA.
ACCESSION   NM_025560
VERSION     NM_025560.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Pagliarini,D.J., Calvo,S.E., Chang,B., Sheth,S.A., Vafai,S.B.,
            Ong,S.E., Walford,G.A., Sugiana,C., Boneh,A., Chen,W.K., Hill,D.E.,
            Vidal,M., Evans,J.G., Thorburn,D.R., Carr,S.A. and Mootha,V.K.
  TITLE     A mitochondrial protein compendium elucidates complex I disease
            biology
  JOURNAL   Cell 134 (1), 112-123 (2008)
   PUBMED   18614015
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ147000.1, AK007842.1 and AI157209.1.
            
            On Oct 4, 2017 this sequence version replaced NM_025560.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI903748.1, AK007842.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-7                 CJ147000.1         3-9
            8-817               AK007842.1         2-811
            818-824             AI157209.1         1-7                 c
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 84.15 cM"
     gene            1..824
                     /gene="Oxld1"
                     /gene_synonym="1810049H13Rik"
                     /note="oxidoreductase like domain containing 1"
                     /db_xref="GeneID:66431"
                     /db_xref="MGI:MGI:1913681"
     exon            1..258
                     /gene="Oxld1"
                     /gene_synonym="1810049H13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..657
                     /gene="Oxld1"
                     /gene_synonym="1810049H13Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     oxidoreductase-like domain-containing protein 1"
                     /codon_start=1
                     /product="oxidoreductase-like domain-containing protein 1
                     isoform 1"
                     /protein_id="NP_079836.1"
                     /db_xref="CCDS:CCDS25735.1"
                     /db_xref="GeneID:66431"
                     /db_xref="MGI:MGI:1913681"
                     /translation="MGSPLQTLSRGGRVRAALWCWTQARGLSGRQCPNRVARSLSCSR
                     GFPVRGGRPALGGTMVSVLTESFLQGTQHFSSWDCCQSLHRHRAPVQVTDSRRNLGMD
                     HREEGFQVGTEDDREPKASLPRGNPTGPPCSLPPELEPPTNCCMSGCPNCVWVDYAEA
                     LLRLYQDGGEKALAILEEHVTDENLKAFLRMEIRLRMQSGA"
     exon            259..820
                     /gene="Oxld1"
                     /gene_synonym="1810049H13Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      797..802
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Oxld1"
                     /gene_synonym="1810049H13Rik"
                     /note="hexamer: AATGAA"
     polyA_site      818
                     /gene="Oxld1"
                     /gene_synonym="1810049H13Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcttcctgcg ctgcgtcccc aagctccttg gctccggcag ccgcaccagc tatggggtcg
       61 ccgctgcaga ccctgtcccg gggaggccgg gtgcgagctg cgctctggtg ctggacacaa
      121 gcccgcggcc tgagcggccg ccagtgcccc aaccgggttg cgcgaagcct ttcgtgcagc
      181 cggggtttcc ccgttcgggg aggcaggcca gcgcttggag gaaccatggt cagcgtgctc
      241 actgagagct ttcttcaggg aacgcaacat ttctccagct gggactgctg ccagagtctt
      301 cacagacacc gtgctccagt gcaagtcact gatagccgca gaaacttggg gatggaccac
      361 agggaagaag gtttccaagt aggtacagag gatgacaggg agccaaaggc ttccctgccc
      421 agggggaacc ccacagggcc cccatgctcg ctgccacctg agcttgagcc tcccaccaac
      481 tgctgcatga gtggctgccc taactgtgta tgggtagatt atgccgaagc tctgctgagg
      541 ctctaccagg atggcgggga gaaggccctg gccattctag aggagcacgt gacagatgag
      601 aacctcaagg ccttcctcag gatggagatc cggctccgca tgcagagtgg agcctgagcc
      661 attttacccg ggactcctta tcatggacag acactaccct taaggaacca gagggtcact
      721 tttatccctg agtctggaag actccacaag tctgcaagga ttaggaattc ttgtgtaaca
      781 acttcacctc agaataaatg aatcctctat gataaccatg aaaa
//
