LOCUS       NM_001289817            2018 bp    mRNA    linear   ROD 08-OCT-2024
DEFINITION  Mus musculus ovo like zinc finger 3 (Ovol3), mRNA.
ACCESSION   NM_001289817 XM_006544158 XM_355880
VERSION     NM_001289817.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Kumar,A., Bhandari,A., Sinha,R., Sardar,P., Sushma,M., Goyal,P.,
            Goswami,C. and Grapputo,A.
  TITLE     Molecular phylogeny of OVOL genes illustrates a conserved C2H2 zinc
            finger domain coupled by hypervariable unstructured regions
  JOURNAL   PLoS One 7 (6), e39399 (2012)
   PUBMED   22737237
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Lin,Q., Donahue,S.L., Moore-Jarrett,T., Cao,S., Osipovich,A.B. and
            Ruley,H.E.
  TITLE     Mutagenesis of diploid mammalian genes by gene entrapment
  JOURNAL   Nucleic Acids Res 34 (20), e139 (2006)
   PUBMED   17062627
REFERENCE   3  (bases 1 to 2018)
  AUTHORS   Li,B., Nair,M., Mackay,D.R., Bilanchone,V., Hu,M., Fallahi,M.,
            Song,H., Dai,Q., Cohen,P.E. and Dai,X.
  TITLE     Ovol1 regulates meiotic pachytene progression during
            spermatogenesis by repressing Id2 expression
  JOURNAL   Development 132 (6), 1463-1473 (2005)
   PUBMED   15716349
REFERENCE   4  (bases 1 to 2018)
  AUTHORS   Li,B., Dai,Q., Li,L., Nair,M., Mackay,D.R. and Dai,X.
  TITLE     Ovol2, a mammalian homolog of Drosophila ovo: gene structure,
            chromosomal mapping, and aberrant expression in blind-sterile mice
  JOURNAL   Genomics 80 (3), 319-325 (2002)
   PUBMED   12213202
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC149067.3.
            
            On or before Jan 31, 2014 this sequence version replaced
            XM_355880.9, XM_006544158.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849383,
                              SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1400              AC149067.3         44065-45464         c
            1401-1465           AC149067.3         43921-43985         c
            1466-1667           AC149067.3         43034-43235         c
            1668-2018           AC149067.3         41996-42346         c
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 17.34 cM"
     gene            1..2018
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /note="ovo like zinc finger 3"
                     /db_xref="GeneID:381867"
                     /db_xref="MGI:MGI:2388075"
     exon            1..1400
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /inference="alignment:Splign:2.1.0"
     CDS             1307..1876
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /note="OVO homolog-like 3"
                     /codon_start=1
                     /product="putative transcription factor ovo-like protein
                     3"
                     /protein_id="NP_001276746.1"
                     /db_xref="CCDS:CCDS80691.1"
                     /db_xref="GeneID:381867"
                     /db_xref="MGI:MGI:2388075"
                     /translation="MPRVFLVRSRRPQPPNWSHLPDQLRGDAYVPDCSSLAVPPAHRS
                     SGLRDTWAVSSQGTLTSAPKGPGTLGCPLCPKAFPLQRMLTRHLKCHSPARRHVCHYC
                     GKGFHDAFDLKRHMRTHTGIRPFRCGACGKAFTQRCSLEAHLAKVHGQPASYAYRERR
                     EKLHVCEDCGFTSSRPDAYAQHRTLHRTT"
     exon            1401..1465
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /inference="alignment:Splign:2.1.0"
     exon            1466..1667
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /inference="alignment:Splign:2.1.0"
     exon            1668..2018
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1907..1912
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /note="hexamer: AATAAA"
     polyA_site      1931
                     /gene="Ovol3"
                     /gene_synonym="Gm1903; movo3"
                     /note="major polyA site"
ORIGIN      
        1 ttttctcaat tgaagttccc tctttccaaa tgactccagt ttgtgccaag ttgatataaa
       61 actagccagt acaccgcata aaggtagaaa gtgagccaat tgctatggcg tcctcatggg
      121 ccattgtgtg tgccctcaca ccaccaccac caaactgtga aaaatggaag cctttgtaat
      181 gactttcccc ctggctggaa ctgggggttg gttttcctcc ccagctaaga tcagattggg
      241 aatattaaga tggctggggg gtggggtgga gaaggcactt ggaatgcaag ccggagggca
      301 gaccccaccc aaacctgtag gctggattag aatcctttgg ttccaagaac cccgctctcc
      361 gttttgccta ttccagctta gatcacttca cggttgacta ttcttggtgt cactgctgtc
      421 tccttgtggc cctgcacagt gtgctcattt tcaatgctga gctaagttaa gatctgccta
      481 tagttagaag tatagaacca cgttcagaag actgtcagat aaaccagaga aggtaactgt
      541 gaagagagtg ttcacagttc tgaacttcta gttcagagat cagagaagga ctgaactaga
      601 acagcctacc cagagtggat gggaggagtc cctacactca ctaggtccta gtcattttaa
      661 cgccctaagc ctgaatgagg ccatgtcatc tttggaaatc taaagatcag atagtgagaa
      721 agagagagag acagagagac agagagagcg agcttgagct tccggcttgt ggaagcacag
      781 ctcccatctt tatttttcct ttacctactc agtttgctgc caccctacac cagcggcaca
      841 gaacaatcac agctgtcccc acctgcatcc tcggacagct gctgtgattt gaataactag
      901 gcaggctgat ggatgtcctg gactgatttg cctggtaaat agtccctaga gtcctgtacc
      961 cttccaggtc tggagccatg tgtctttttg atctccatcc ccaggagcag cctaggctct
     1021 tctctcactc aagcctccct ggggggtgag ttctccactg tctccattct caggagatgg
     1081 aggagttgcc tggaagccta gcctagagaa ggagccatga tggcaggccc cagctgaggt
     1141 aaccagagcc agctaaggtt gctccccaag cttgtctcaa aatttgcatg aagagaatga
     1201 ggcttccagg agtctcctga tttcacctag ttctggggcc caggtctgac aggcagcagg
     1261 cagaggcagc agctctgtga agagccattt caccatcctg aaagcaatgc ccagggtctt
     1321 tcttgtgagg agtcggcgtc cacagccacc taactggagc caccttcctg accagctccg
     1381 gggagatgct tatgtcccag actgcagcag cctggcagtg ccaccagcac acagatcttc
     1441 tggtctgaga gacacctggg cagtgtcctc acaggggaca ctgacctctg ctcccaaggg
     1501 ccccgggaca cttggctgcc cactctgccc caaggccttc ccgctgcaac gcatgctgac
     1561 tcggcacctc aaatgccaca gcccagcgag gcgccacgtg tgccactatt gtggtaaagg
     1621 ctttcacgat gccttcgatc tcaagcgtca catgaggact cacactggaa tacggccatt
     1681 ccgctgcgga gcctgtggga aagctttcac ccagcgctgt tccctggaag ctcaccttgc
     1741 caaggtgcac gggcagccag ccagctacgc ttaccgggag cgcagggaga agctgcacgt
     1801 gtgtgaagac tgtggcttca ccagctctcg gccggatgct tatgcgcagc accgcaccct
     1861 acaccgcacg acctgataag actggctgct ccctacccac gagagaaata aacacgggaa
     1921 acactagtgt agaaactggc atttattaca ggtggaagaa ggaacgatca ctcagtccag
     1981 cggtggccgc agtgtggggc agtgcaaaca tagtacag
//
