LOCUS       XM_006513933            7440 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus otogelin-like (Otogl), transcript variant
            X5, mRNA.
ACCESSION   XM_006513933
VERSION     XM_006513933.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006513933.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7440
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..7440
                     /gene="Otogl"
                     /gene_synonym="EG628870; Gm6924"
                     /note="otogelin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 56 long SRA reads,
                     2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 1 sample with
                     support for all annotated introns"
                     /db_xref="GeneID:628870"
                     /db_xref="MGI:MGI:3647600"
     CDS             558..5660
                     /gene="Otogl"
                     /gene_synonym="EG628870; Gm6924"
                     /codon_start=1
                     /product="otogelin-like protein isoform X4"
                     /protein_id="XP_006513996.1"
                     /db_xref="GeneID:628870"
                     /db_xref="MGI:MGI:3647600"
                     /translation="MIEGTPQLHAHAWRVSSTCFAPVHVPMVDPCNINQQNIGYAAHC
                     DVIHQELFAPCHVYVSPGLYYQLCRHDACKCGSPCLCNALAHYAYLCGQRGVPIDFRA
                     HISFCAVVCQKGMLYHHCSSLCLRSCTSLSSPEQCKDDCAEGCNCPEGKFYEETLNFC
                     VPIYHCRCHYRGSIYQPGELIPTPSGLCQCSNGTVKCDELATPSTVHACPEGKEYFDC
                     RFPDPALPAGGINCETTCANLAMNFTCAPSSPCISGCVCAAGMAEHKGKCYVPESCPC
                     IWKDWEYSSGEVISTPCYTCVCRRGMFNCTYYPCPAVCTVYGDRHYHSFDGLEYDYIS
                     DCQVFLIKSTDDSDISVISQNKKCFDNDIVCSKSVLISIGDTEIYLNDAPYKQKRSGF
                     FLESRPEYQLWKAGFYIVIYFPEEDITILWDEKTTIHIKVGPQWKNKLAGLCGNFDKC
                     TSNDMTTSNNIEVRNAQVFGDSWALGQCEDLMEALKPCEAHQNKFPYAKRECSILYSD
                     VFAPCRNVIDVTSFAKNCHEDTCNCNLGGDCECLCTSVAAYAYKCCQEGVPVHWRSPT
                     VCALDCEYYNQGLGEGPYMLASYGQSGLVLGANMTSRSVFSLPRSNNRGNLFFIFMIT
                     PGLFKEKTSSLALVSLESAERPNYFLYVHDNDTLSLKLWRANSEFHQRATFFHHQGLW
                     IPGYSAFELYSKKGYFIVFMGSSVKASKYDDSEEFKQSSSFSIEEIQAVVPYRRMCEW
                     RYEPCATPCFKTCSDPEALACTFLPPVEGCLPYCPKNMILDETTLKCVHPEDCIPLFP
                     TEPALPPDITPSDMTPTPGLECEPQQFDPVYNCSQYICLNMEWTFYNWSLNCPKDLEM
                     PDCGFRGWPVQVNTDICCPEWECPCRCSMLSELSIITFDGNSAALSSMASYILVRVPG
                     EIVVVHIDKCSMNQNGHALKKPASFGRISGLCFKKLNVTTSIHKILINRVVRKVDVDS
                     IVVPLPFSSHELFIEDSGTMYVITTPAGLIIKWAHLTGIIDIHFGPQFNLSSYTEGLC
                     GICNDNPDDDLRMQNGTIITNMEDIELFIGSWEIEKSFEVTMRRPVRNCTEYDCSHCI
                     ELLNREGFIPCHDKVSPRDFCEKMWINYTYFWSYECDAISAYVALCNKFDICIQWRTP
                     DYCPLSCPEGKEYQPCVRPCEARTCLNKWFYGHSSCLNLREDCVCKNGTILHRPDKTL
                     CIPEQECVCTDREEHPRSAGEIWNGGIDECTLYKCLEDGNIIPIEPVCEEEPSPICER
                     TAEVVIGIVDKLTCCSKKVCGCDMSLCDRTIPPCTNSQKLIVGYSALSCCPQYECECD
                     TVRCPDISTPVCRDDQFVLQVRQGEPCCFYPSCVCKTCTEPTPQCTDGEFLTVNINTT
                     HLCCPQYYCVCEPDLCPPPSLECAKDMNLVKENVSGQCCPNWRCECNCETLVMPTCDV
                     GEFAAIDQNFQTDCGCVQYLCEKDDVCVFQEVSVLNPGQSLIKYLEEEFCYIIECLDE
                     KDNYTDFHTLNVTMVNCSKDCDAHQIYIPSSSDYDCCGTCKNISCKFIMENGTSVIYE
                     EGSTWHYNCSTYECVNTEEGATILNYSMVCPPFNETECKLNEGIVKLYNEGCCKICKR
                     EERICQKVIIKSIIKKQDCVSQSSISVASCDGKCPSATIYNINVESHLRFCKCCRENG
                     VRNVTVPLHCSGNGTEVMYTLQEPIDCTCQWN"
ORIGIN      
        1 ccattgactg aacggcgttt gaaggccacg gaaggtggaa tttcatattt ggcccctcag
       61 cgctgtagtc tcactttata agggtggtgg ttctcgtctg ttgggtggtg gttctcttcg
      121 gttctggtct gccgaggaaa ctgaaacagg cgaataagcg tgaaggaagg agggttttat
      181 atcaactttc accccaattt taatctatga ttgcttagta tttcaggcct tccagtataa
      241 attgatataa tgagccaaga gtatagactg ttgtactcca tgctatttgt cagtaggtta
      301 aatagcccat gtgaactacg tgcctctgcg tttccacgtt catcttaacc tacactcaga
      361 ttgaatgttt ggttgtgtga gtgatgcttg gctatcggag cggagccaaa tctgatcctt
      421 tgctttcttg ggcgccagct taatgagcct gcttagcatt tctcagagct tgtggttttc
      481 tttataaaat ccggcacaag agtgttttct gcacaaggca gagatggaga ctcaatagca
      541 tcatttctcc atcaggcatg atcgaaggaa ccccacagct ccacgcacat gcgtggagag
      601 tctcctccac gtgtttcgcg cctgtccatg tcccgatggt ggatccctgc aatattaacc
      661 aacagaacat tgggtatgca gcacactgtg atgtcatcca ccaggagctc tttgctcctt
      721 gccatgtcta cgtcagtccc gggctgtact accagttgtg tcgccacgat gcctgcaaat
      781 gtgggagccc ctgcctgtgt aacgctctcg cccactacgc ctacctgtgt ggtcagcgtg
      841 gtgtgcccat tgatttcaga gctcacatct ccttctgtgc tgtggtgtgt cagaagggca
      901 tgctgtacca ccactgctcg tcactctgcc tccgctcctg cacctctctc tcctcccctg
      961 agcagtgcaa agacgactgt gctgaagggt gcaactgtcc tgaaggcaaa ttctatgaag
     1021 agacacttaa cttttgtgtg cccatatatc actgccggtg tcattatagg gggagcattt
     1081 accagccagg ggagctcatt ccaaccccct caggcttatg ccagtgttca aatgggactg
     1141 tgaaatgtga tgagctagca acaccctcta ctgtccacgc ctgcccagaa gggaaggaat
     1201 attttgactg caggtttcct gaccctgcgt taccagctgg tggtataaac tgcgagacga
     1261 cgtgcgcaaa cctggccatg aacttcacct gtgctccatc ctcgccttgc atcagtggct
     1321 gcgtttgtgc tgcaggaatg gcagaacaca aaggaaaatg ctatgttccc gaaagctgtc
     1381 cctgcatctg gaaggactgg gagtacagct caggggaggt catctctaca ccgtgttaca
     1441 cctgtgtttg tcggcggggg atgttcaatt gcacatatta tccatgtcct gcagtatgca
     1501 cagtatatgg ggaccggcat tatcactcct ttgatggatt ggaatatgac tatatcagcg
     1561 attgccaagt gtttttgata aagagtacag acgattctga tatatctgtg atttcccaaa
     1621 acaagaaatg ctttgacaat gatattgttt gttctaaaag tgttttgata tcaattggag
     1681 acactgaaat atacctcaat gatgctcctt acaaacagaa gcgatcaggg tttttcctgg
     1741 aaagcagacc tgagtaccag ctctggaagg ctgggttcta catagtaata tacttcccgg
     1801 aggaagatat caccattctg tgggatgaga agacaaccat ccacatcaaa gtcgggccac
     1861 agtggaagaa caagctggca ggattgtgtg gtaactttga caaatgtact tccaatgaca
     1921 tgacaacatc taataacatt gaagtgcgaa atgctcaggt gtttggagac agctgggcct
     1981 taggacagtg tgaagatctt atggaggccc tgaagccctg cgaggcacac caaaacaaat
     2041 ttccctatgc caagagagaa tgttccattt tgtacagtga tgtttttgct ccttgtcgca
     2101 atgtgattga cgtcacctct tttgccaaga actgccatga agacacgtgt aactgtaacc
     2161 tgggtgggga ctgtgaatgc ctatgtacca gtgtggccgc atacgcttac aaatgctgcc
     2221 aggaaggggt gcctgttcac tggaggtcac ccactgtctg tgcccttgac tgtgaatatt
     2281 ataatcaagg gcttggggaa ggaccttata tgctggcaag ttatgggcaa agtggccttg
     2341 ttcttggtgc caatatgacc agtagaagcg ttttctcttt gcccagaagc aacaatcgtg
     2401 gtaatttatt ttttattttt atgatcactc cgggcctttt caaagagaag acatcctcat
     2461 tggctcttgt ttccttggaa tctgctgaaa ggcccaacta ctttctctat gtccacgaca
     2521 atgacactct tagcttgaag ctgtggcggg caaactcaga atttcatcag agagcaacat
     2581 ttttccacca ccaaggcctc tggattcctg gctacagtgc attcgaatta tacagcaaga
     2641 aaggctactt catcgttttt atgggttcca gtgtcaaagc gtcaaaatac gatgactcgg
     2701 aagaattcaa gcagtcaagt agctttagca tagaagaaat ccaggcagtg gtcccttaca
     2761 ggaggatgtg cgagtggaga tacgaacctt gtgctactcc gtgttttaaa acatgcagtg
     2821 atccagaggc cttagcctgt acattccttc caccggttga aggatgcttg ccatattgcc
     2881 ccaagaatat gatcctggat gagacgactc ttaaatgtgt tcacccagaa gactgcatac
     2941 cactgtttcc aacagaacca gcattgccac cagacattac cccatcagac atgacaccga
     3001 ccccaggttt ggaatgcgag cctcaacaat ttgatcctgt ttataactgt agccaatata
     3061 tctgccttaa catggagtgg accttctaca actggtctct gaattgcccg aaggacttgg
     3121 aaatgcccga ctgtgggttc cgaggctggc ctgttcaagt gaatactgat atatgctgtc
     3181 cggagtggga atgcccctgt cggtgctcca tgttgtcaga gttgagcatc attacatttg
     3241 atgggaacag tgcagcacta tctagtatgg cttcttacat cttagtaaga gtccccgggg
     3301 aaattgtagt tgttcacatt gacaaatgtt ccatgaatca gaatggacat gcccttaaaa
     3361 aaccagcttc ttttggacga atctcaggac tttgttttaa gaagctaaat gtgacaacat
     3421 ctatacataa aatacttatc aacagagtgg taagaaaggt agacgtggat tctattgttg
     3481 tgcctttgcc cttttcaagt catgagctgt tcatagaaga ttctggaaca atgtatgtga
     3541 ttactactcc tgctggctta atcataaagt gggctcacct tacaggaatc atagacattc
     3601 acttcggccc ccagtttaac ttgtcatctt acacagaagg gctttgtggg atttgcaatg
     3661 acaatccaga tgatgacctc aggatgcaga atggcaccat cattaccaac atggaagaca
     3721 tagagttatt tattggcagc tgggaaattg agaaatcatt tgaagtgaca atgagaagac
     3781 ctgtgaggaa ctgtactgaa tatgactgca gtcattgcat cgagttattg aacagagaag
     3841 gtttcattcc atgccatgac aaagtctcac caagggactt ttgtgaaaaa atgtggatca
     3901 actacaccta cttctggagc tacgaatgtg atgcaatctc tgcatatgtg gctttgtgca
     3961 acaaatttga tatctgcatt cagtggcgca cccctgacta ttgccctctg agttgtccag
     4021 agggaaagga atatcagccc tgtgtgagac catgtgaagc aagaacatgt ctcaacaaat
     4081 ggttctatgg acactcctca tgtctgaatt tgagagaaga ctgtgtgtgc aagaatggaa
     4141 ccattcttca ccggccagat aaaacactat gcatcccaga gcaagaatgt gtgtgcactg
     4201 acagagagga gcacccccgc agtgctgggg agatttggaa tggtggcata gatgaatgca
     4261 ccctctacaa atgtctggag gatggaaaca ttattcctat agagcctgtc tgtgaagaag
     4321 agccttcccc catctgtgaa cgaacagctg aagtggtcat aggcattgtt gataagctga
     4381 cctgctgttc taaaaaagtc tgtggctgtg acatgagttt gtgtgacagg accatcccac
     4441 catgcacaaa tagccagaag ttgatcgttg gctatagtgc tctttcttgt tgcccacagt
     4501 atgaatgtga atgtgatacg gtgagatgtc ctgatatttc aacgccagtt tgcagagatg
     4561 accagtttgt gcttcaagtt cgacagggag agccttgctg tttctaccct tcctgcgttt
     4621 gtaagacatg cactgaacca actccacaat gtaccgatgg ggaattcctc actgttaata
     4681 tcaatactac acatttatgc tgtcctcagt actactgcgt ttgtgagcca gatctttgcc
     4741 ctccaccatc acttgagtgt gcaaaagata tgaacctggt gaaagaaaat gtatctggac
     4801 aatgttgccc aaactggcgt tgcgaatgca actgtgagac tcttgtcatg ccaacctgtg
     4861 acgtgggaga atttgctgca atagatcaaa actttcagac tgactgtggc tgtgtacagt
     4921 atctctgtga aaaggatgat gtgtgtgtgt tccaagaagt atcagtattg aatcctgggc
     4981 aatctctaat aaagtattta gaagaggaat tttgttatat aatcgaatgt ctggatgaaa
     5041 aagataacta taccgacttt catactttga atgttacaat ggtgaactgt tcaaaagact
     5101 gtgatgctca ccagatatac attccatcct ccagtgatta tgattgctgt ggaacatgta
     5161 aaaatatatc ctgcaaattt attatggaaa atggaacatc agttatatat gaggagggga
     5221 gcacctggca ctataactgc agcacgtacg aatgtgttaa cactgaggag ggagcaacga
     5281 ttctaaacta cagcatggtt tgccctcctt ttaatgaaac tgaatgcaaa ctgaatgaag
     5341 ggattgtgaa gctttataat gaaggctgtt gcaagatctg caaacgagaa gagcgaatat
     5401 gccagaaagt gatcattaaa tccatcataa agaaacagga ctgtgtaagc caaagctcta
     5461 ttagtgtggc atcttgtgat gggaaatgcc cgtcagctac catatataac atcaatgttg
     5521 aaagtcacct gaggttctgc aagtgctgtc gtgaaaatgg agtgcgaaac gtgacggtgc
     5581 ctctgcactg ctcaggaaat ggcactgaag taatgtacac actccaggag ccgatagact
     5641 gcacatgcca gtggaactga gtgctagcat tcgaaggagg ctgcacgaca gtaacatgtc
     5701 aggcagcgtc atctttcatc actgttattt aggcacatgg cagacttgca ccctataatg
     5761 tgtctttacc actcttatga tttgaaaacc taacagtgga cttgaaatat gtatagtttt
     5821 aatggaaaaa attagatttg ttgttttatt ttagtgaatt aaattattgt aagttgttta
     5881 gcggaaatgc tgtcacattt aaagctgtag ggtaggacaa attaagtctt agtgtaaagt
     5941 agaagcttgt gctgcagaat gctttccatt cagtcccttg tgccctggtt ttggttttgg
     6001 ttttgtttgt tttgatttgc aaagtcttcc gatgctgtcc aaactgagga agactttaat
     6061 ttttctttcc tagtcttatc aatgtgatta gttgtaattg gctcatagat aatcatagtg
     6121 agttgtgttt cttagaaaca gaacatagaa ttgtaggatg ttggcttagt taacacctca
     6181 aaaaatatta ggaatgctat tgcaaattcc cctaattatt attatttttt acatgtgatg
     6241 gtaccataac atttctggga cttctacagc aatgtagcaa caatgtggcg agtttacgtt
     6301 aaggactaga ctcctttcta gatattttgg gttctggttt catgatcgtt tattgtaaat
     6361 gatatagcaa ggtgattttt aaaaagtcac agaatcttcc attactagaa agcactggat
     6421 aggattaaaa cgtttttaag accaatatcc ctttagaatg ctcatgcata caataatagt
     6481 tatttcaatt ttaagggaaa gaaaaccata gtgtcgttca ttatttagag gaagaccagg
     6541 agctatattt ttataccatt aaaattatta attatattgt tattatttaa catttagttt
     6601 agttaatgtt tatcactggg gacggtttct aaatatatca gtacactatg aaacctgagg
     6661 gcaactttgc cattaaaact gctgctttgt cagtgcaggg acatacagtt atctgaacgt
     6721 attcataacg ttagaatgga atgccgctct ctgaaactac agaaaatcat tgacatttgc
     6781 aaataacttg ctctgagatc tttgcaaatt tccaaagtct ttctaccagg gagtatagaa
     6841 ttatttgagt ttcttccgta gtaaaacgag agtgccttag tgtggttatg atcatcaatg
     6901 aaggtcagtg tcaataaaag cacattaaaa cttcatcgac aagccaatgc ttggatttta
     6961 ataggctagt gccgacttga gctatgtgac ttgttttcaa acattaatgt ttccatttaa
     7021 aaattatgct tctaagaaat actgtagtta tgaagtgttt ggatttccaa ggtctcttaa
     7081 taatgtgtaa aagtattacc tggaatgtcc tgatgtctac tctacatgaa aatgatttac
     7141 attgtctgtt ttaatactgg cattttctct agatataaac atttttgcgt ctgtgattat
     7201 tagcatattg atggagttgg acattcttgt ctaaatacat taacatttta cataaagaca
     7261 tcatgtatct caatcagaaa tttgtaatat atgttaccta tcactttcct gtaaattcta
     7321 ctctctgtgg actatctatt attaaatatt aactgatctt taaatcaatt tgtggggaga
     7381 agagaaatat tcttctgcta ttttataaac aacaaataaa ataaatacat gttgaagttc
//
