LOCUS       XM_006498066            4043 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus origin recognition complex, subunit 4
            (Orc4), transcript variant X3, mRNA.
ACCESSION   XM_006498066
VERSION     XM_006498066.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006498066.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4043
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..4043
                     /gene="Orc4"
                     /gene_synonym="mMmORC4; Orc4l; Orc4P"
                     /note="origin recognition complex, subunit 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 20 ESTs, 877 long SRA reads, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 35 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:26428"
                     /db_xref="MGI:MGI:1347043"
     CDS             329..1456
                     /gene="Orc4"
                     /gene_synonym="mMmORC4; Orc4l; Orc4P"
                     /codon_start=1
                     /product="origin recognition complex subunit 4 isoform X2"
                     /protein_id="XP_006498129.1"
                     /db_xref="GeneID:26428"
                     /db_xref="MGI:MGI:1347043"
                     /translation="MSSRKTKSNAHAECLSQVQRILRERFCHHSPHSNLFGVQVQYKH
                     LIELLKRTAIYGESNSVLIVGPRGSGKTTLLNHALKELMEIEVSENVIQVHLNGLLQT
                     NEKIALKEITRQLNLDNVVEDKVFGSFAENLSFLLEALQKGDRTSSCPVIFILDEFDI
                     FAHQKNQTLLYNLFDISQSAQTPVAVIGLTCRLCLSEDSTVLEVLQKHFSVNKNLQSL
                     HMLLMLALNRVTVSHPFMTSADLMEAQHMCSLDSKANIVHGLSVLEICLIIAMKHLND
                     IYEEEPFNFQMVYNEFQKFIQRKAHSVYNFEKPVVMKAFEHLQQLELIKPVERTSVNS
                     QREYQLVKLLLDNTQIMNALQKYSNCPTDVRQWATSSLSWL"
ORIGIN      
        1 cagggggtag ccgggcgggg gcgggaagag ggaggaagtt gctactctag agcagcccca
       61 gctgcctcct ccctcctctg ggagagcgga gggacggaag taggcgggga ccgacctgaa
      121 agcaggtcac gtggtggggc ggagcggggg cggggccgcc aaagccggcc ggtcgccgtg
      181 catgctggga gttgctgtgc gcggtgggct gcagtaggag cagcgggact gagaaggtgg
      241 tgaacatcct tcggtcctca ccgtcggcgg cggccggctt tgcccgattt aggcaggctt
      301 gactgggaga ggatttgaat taatcgagat gagcagtcgt aaaaccaaga gtaatgcaca
      361 tgcagagtgt ctttcacagg tacaaagaat tttacgtgaa agattttgtc atcatagtcc
      421 acatagcaac ctctttggag tgcaagtaca atacaagcat ttgattgagc tactcaaaag
      481 aactgctatc tatggagaaa gcaattctgt actcattgtt ggaccacgag gatcaggaaa
      541 gaccacatta ttaaatcatg ctttgaaaga actcatggaa atagaagtga gtgaaaatgt
      601 gatacaagtt cacttaaatg gactcctgca gacaaatgaa aaaattgctc tgaaagagat
      661 cacaagacaa ttaaatctag acaatgtagt tgaagataaa gtttttggaa gctttgctga
      721 aaacctttca tttcttctgg aagctttgca aaaaggtgac cggactagca gttgcccagt
      781 gatcttcata ctggatgaat ttgatatttt tgctcatcag aaaaatcaaa cactccttta
      841 taatcttttt gacatttctc aatctgcaca gacaccagta gcagttattg gacttacatg
      901 tagattgtgt ctctctgaag attcaactgt gcttgaagtc ctacagaaac atttcagtgt
      961 caacaaaaac ttgcagtcat tacacatgct attgatgctt gctttaaatc gagtaaccgt
     1021 atcacaccca tttatgactt cagcagatct gatggaggca cagcatatgt gtagcttgga
     1081 ttctaaggcg aatattgtac atggtctgtc agtcttggaa atctgtctta taatagcaat
     1141 gaaacattta aatgacatat atgaagagga gccctttaat tttcaaatgg tgtataatga
     1201 atttcagaaa ttcattcaaa gaaaggccca ttctgtttat aactttgaga aacctgtggt
     1261 catgaaggca tttgagcact tacaacagtt ggaattaata aaacccgtgg aaagaacttc
     1321 agtaaattct cagagagaat accagctagt gaaactactt ttggataata ctcaaattat
     1381 gaatgctcta cagaaatact ccaactgccc tacagatgtt aggcagtggg caacatcctc
     1441 actaagctgg ctgtgaagat tttaagtaca tttctgtgaa gaccttaaag tactgttctt
     1501 tatttaataa gatacgctac tacattgctt tgtttataaa tagtttatgg gaaatttgca
     1561 cttagtatgt tttgaataat gaccacgcat ggacacagtt tcattaattt aaattgcacc
     1621 acacaagtag cagttcataa gaataaaatg tgcttatttt acgcatggtc cataaaatga
     1681 tttgatactc ttttaaagtg tatgtggtcc attagaaagg ttaattccaa caaagcattt
     1741 agtttacaga tcataatcct aagcagtcag gagagaaata cgaacagaaa ttacatgagg
     1801 aatattccgg ctagattagg cgcctgtgga tattggagtt gggttgattt tcctgaattg
     1861 gttcctatag gatcctccaa ttttggatct tctacagatc ccccagtgtt ctagtttagt
     1921 aaactggccc atttgggctg aagaacttgt gtggaaagag tccaaacaac tcatcatttt
     1981 cttctctgca tatctcacca caattgtagg attttttttt ccatgtacat tctttgtata
     2041 tgttcagaag ggatcaaaat tgccatctaa caggtacctt aaaggattcc tgggcatcta
     2101 cttccacaac taatacgtat tccacagtgt tggctgttgg cttcaaaaaa aggaattctc
     2161 ttaacatgct atgttggtca gcgtccacct cctaagctca taggcaaaac tcacaggtta
     2221 aaatggaatt taatctcaga gatcctttgt tcaagaatat ttgattgcat atttagttgt
     2281 agtaagattt tataaaatac ataatccttt gtatgtgcag tttgtaaagt atctgcagaa
     2341 ttaaatgctc ttatttacag atcagaaaac taacaccagt gtcaggatca cagtatggga
     2401 atgactgatg tgaccttgaa tgcagcttgg tttgactgac attaaagcca gtgttaaaaa
     2461 ctaaagctta gcaacaaatg ttttactatt tttacaggat actgtaagga ataatttgac
     2521 ttttaagaaa tcttaaatat aaattttctg tgcattaatg tagtacctca tagttaaaac
     2581 tttcttcatt cacagccttt ccctttcaca gtaaaacatg cttagctttc tgtgtctttc
     2641 ttttagtcat gataaaaatg aagctgtaat atcaaggtca tacaagtata aacatatatg
     2701 tccaattttt aaactacttc caccttacaa gttgttcaaa atacattatt agataattct
     2761 aaagtgagaa aaattagatt ctaaaacaca aatcacaaga acgtttgata ttgaagtgtc
     2821 tggctttaac atgtgattcc acaagagtag aagcaagaaa ggtatatact tttaggagcc
     2881 taaaaaacat ttccaaacta gcccaagcta tctcaactac aggagcggag ggggacgaat
     2941 gattgtgaac acaaagtctg acttgaagat tctctgcaat gaagagaatt cattcattca
     3001 ctctgctcaa gactccactg ggccaagaga tggaagaaca aacaaaaagg actttccatg
     3061 tagccttcct ccatgtggcc tagtgaaaca tggatcttgt ttaaaaggca tctgatttta
     3121 tgcagacacg tgtctgaaaa attaaaatcc attgtccaaa cttccataca ttaggtaacg
     3181 tcttataatg taaggacatg gtatccactg ccctaaagat ttagacatcc atcacagact
     3241 ctgcagtggt gtttctactc cagtgaggta ctttctacca tggtgtgcct tttgctgtga
     3301 gtgacttaac agtgcaggtt cttgttgcct tcactgttaa ccctgagagc acataatctg
     3361 atgcatgtgt gactaagaat aagcctatgg tcatgggcaa gaagggccaa catagacact
     3421 tgggtagaaa tacagtctga tcaagcaacg gtgtaaggaa aagtccctaa ttcacaacct
     3481 ccttgatctt atgacccttg aaaacctcaa gaccgaagcc tgaccataag ttggaaagct
     3541 ctcattaccc tctttaacaa cataaattca tagctaaaga aaaactgcat gtgcaaataa
     3601 taccatattc attttttatt taacatgggg atggaatggg gatagcatac attttatttg
     3661 tacaatattt aacaatcact tattcaaggt gggattttat ggggattttt ttcattttta
     3721 gctttctgtt aaatacttgc agaaaaaaaa aatagcaagt acaatatgac agtagtacaa
     3781 caacctgtgc ccaaaacact gacaagaaat acagagtaaa gctaaaataa ttgtttacca
     3841 atattttgag aggtaacaaa tagggagata cgggttgaga ctgcataaaa aacgtactgc
     3901 tggttgaata tctgaggtaa atgatgttta atcaagatgc tacttgtatc tttgtccata
     3961 aattgtaaat aattttatgc acattatacc aaatcttcct aaaaagtaat ttttcaaaaa
     4021 agtaaaaaag agaaactgga aaa
//
