LOCUS       NM_001310551            1041 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 8 subfamily K member 53
            (Or8k53), transcript variant 1, mRNA.
ACCESSION   NM_001310551
VERSION     NM_001310551.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1041)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1041)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL935138.7.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Transcript Variant: This variant (1) represents the reference
            strain (C57BL/6) allele and encodes the longer isoform (a).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1041              AL935138.7         88383-89423         c
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.78 cM"
     gene            1..1041
                     /gene="Or8k53"
                     /gene_synonym="MOR186-1; Olfr1055"
                     /note="olfactory receptor family 8 subfamily K member 53"
                     /db_xref="GeneID:259023"
                     /db_xref="MGI:MGI:3030889"
     CDS             1..1041
                     /gene="Or8k53"
                     /gene_synonym="MOR186-1; Olfr1055"
                     /note="isoform a is encoded by transcript variant 1;
                     olfactory receptor MOR186-1;
                     GA_x6K02T2Q125-47819205-47818258; olfactory receptor 1055"
                     /codon_start=1
                     /product="olfactory receptor 1055 isoform a"
                     /protein_id="NP_001297480.1"
                     /db_xref="CCDS:CCDS84544.1"
                     /db_xref="GeneID:259023"
                     /db_xref="MGI:MGI:3030889"
                     /translation="MDTYNLTVLKYFILTGITDLPELQAPLFGLFLIIYMISVVGNLG
                     LIILTKIDSRLQTPMYFFLRQLSLTDLGYSTAVGPKMLINFVADQPTISYIWCSVQLT
                     FFSIFITTEVFILSAMAYDRYVAICHPLLYTIIMSQRLCHVLVAIPYLYSVFISLWTI
                     IKIFTSSFCGHNIIRHFYCDSLPLILMLCSDTHEIKLIILIFATFNLISSLLVVSISY
                     ILILVSILRMNSSEGRHKAFSTCGSHLTVIVIFYGTLFFMYAQPKSIHSFETGQVASL
                     FYTLVIPMLNPMIYSLRNQEVKQALNRKWKMCVNILFCWEPRPHSPLQDGADSCVLSG
                     KQIICACAKGIL"
     exon            1..1041
                     /gene="Or8k53"
                     /gene_synonym="MOR186-1; Olfr1055"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatacgt acaatcttac agtactgaag tatttcattc taaccggaat cacagatctc
       61 cctgaactgc aggccccttt atttggactc ttcctcatta tatacatgat ctctgttgta
      121 ggtaatttgg gcttgatcat cctcacaaaa atagactcta gacttcagac acctatgtac
      181 ttcttcctca gacagctctc tctcactgac cttggttatt caactgctgt ggggcctaag
      241 atgttaataa attttgttgc tgatcaacct acaatttcct atatttggtg ctcagtccag
      301 ctgaccttct tcagcatatt tatcaccact gaagttttca ttctgtcagc catggcctat
      361 gaccgctatg tagccatctg ccatccacta ctgtacacaa tcatcatgtc acaaagatta
      421 tgtcatgttc tggtggcaat accttacctc tatagtgttt ttatatcttt atggaccatt
      481 atcaagattt tcacttcatc attttgtggc cataatatca tcaggcattt ctactgtgac
      541 agtctgccgt tgatattgat gttatgctca gacacacatg aaattaagct gataatttta
      601 atctttgcaa cttttaattt gatttcttct cttctggtag tctccatatc ttatatcttg
      661 atccttgtgt ccattctcag gatgaactct tcagagggca ggcacaaggc cttctcaacg
      721 tgtggctctc atctgacagt gatagttata ttctatggta ctctattttt catgtatgca
      781 caaccaaaat ccattcactc ctttgagact ggtcaagtcg catctttgtt ctatacactg
      841 gttatcccca tgctgaatcc tatgatctac agtttgagga accaagaggt gaagcaggcc
      901 ttgaatagaa aatggaaaat gtgtgtgaat attctatttt gttgggagcc gcgcccacat
      961 tcgccgttac aagatggcgc tgacagctgt gttctaagtg gtaaacaaat aatctgcgca
     1021 tgtgccaagg gtatcttatg a
//
