LOCUS       NM_146855               1116 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 8 subfamily D member 4
            (Or8d4), mRNA.
ACCESSION   NM_146855
VERSION     NM_146855.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Bush,C.F., Jones,S.V., Lyle,A.N., Minneman,K.P., Ressler,K.J. and
            Hall,R.A.
  TITLE     Specificity of olfactory receptor interactions with other G
            protein-coupled receptors
  JOURNAL   J Biol Chem 282 (26), 19042-19051 (2007)
   PUBMED   17472961
REFERENCE   3  (bases 1 to 1116)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 1116)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 1116)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC136021.5.
            
            On Sep 11, 2009 this sequence version replaced NM_146855.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC138430.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1116              AC136021.5         80723-81838
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 21.42 cM"
     gene            1..1116
                     /gene="Or8d4"
                     /gene_synonym="MOR171-4; Olfr985"
                     /note="olfactory receptor family 8 subfamily D member 4"
                     /db_xref="GeneID:258854"
                     /db_xref="MGI:MGI:3030819"
     exon            1..1116
                     /gene="Or8d4"
                     /gene_synonym="MOR171-4; Olfr985"
                     /inference="alignment:Splign:2.1.0"
     CDS             81..1016
                     /gene="Or8d4"
                     /gene_synonym="MOR171-4; Olfr985"
                     /note="olfactory receptor MOR171-4;
                     GA_x6K02T2PVTD-33825763-33824828"
                     /codon_start=1
                     /product="olfactory receptor 985"
                     /protein_id="NP_667066.1"
                     /db_xref="CCDS:CCDS23076.1"
                     /db_xref="GeneID:258854"
                     /db_xref="MGI:MGI:3030819"
                     /translation="MSIRNHSTVTEFLLLGLTEEPALQLPLFCLFLGIYIVTMVGNLG
                     MIAVIKLNSQLHTPMYYFLSSLSFLDFCYSSVVTPKMLVGFLSRDKAISYSDCMAQLF
                     FFCIFVISECYMLAAMAYDRYVAICSPLLYAVIMSPRVCSLLVAAVFSVGFTDAVIHG
                     GCILRLSFCKSNIIKHYFCDIVPLIQLSCSSTYIDELLIFVIGGFNMIATSLTIVISY
                     GFILSSILRIHSKEGRSKAFSTCSSHLTAVLIFYGSLMSMYLKPASNGSVIHEKVTSV
                     FYTTVIPMLNPLIYSLRNKEVKHALVKLVRRKISS"
     regulatory      1015..1020
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Or8d4"
                     /gene_synonym="MOR171-4; Olfr985"
                     /note="hexamer: AATAAA"
     polyA_site      1042
                     /gene="Or8d4"
                     /gene_synonym="MOR171-4; Olfr985"
                     /note="major polyA site"
ORIGIN      
        1 gctctggaag accggagagc aactgggatt ctcaaccatt tgtcaatttg ttctcatctt
       61 tacacatttc tcagaggaga atgagcataa ggaatcactc cacggtgact gagtttctcc
      121 tgttgggatt aactgaggag ccagcgctcc agctgcccct tttctgcctc ttcttgggga
      181 tttacatagt cacaatggtg ggaaatcttg gcatgattgc agtcatcaag ctgaactctc
      241 aacttcatac ccccatgtat tatttcctca gtagtttgtc ttttttagat ttctgctact
      301 cttctgttgt tacccccaaa atgctggtgg ggtttttaag cagggataag gctatctcgt
      361 attctgattg tatggctcag ctgttctttt tctgtatttt tgtcatctct gaatgctaca
      421 tgttggcagc catggcctat gatcgctatg tggccatctg cagtccactg ctctatgctg
      481 tcattatgtc gcctcgggtc tgttctctgc tggtggctgc tgtcttttca gtgggcttta
      541 ctgatgctgt gattcatggg ggatgtatat taaggttatc tttctgcaaa tccaacatca
      601 ttaaacacta tttctgtgac attgttccac ttattcaact ctcctgctcc agcacttaca
      661 ttgacgaact tttgatcttt gtcattggtg gatttaacat gatagccacc agcctgacaa
      721 tagtcatttc atatgggttc atcctgtcca gcatcctccg catccactct aaagagggca
      781 ggtccaaagc cttcagcacc tgcagctccc acctgacagc tgttcttata ttttatggct
      841 ctctcatgtc catgtatctg aaacccgctt ctaatggttc cgtcatccac gaaaaagtga
      901 cctcagtgtt ttacaccaca gtgattccca tgttaaatcc actgatctac agtctaagga
      961 acaaggaggt aaaacatgca ctggtgaagc ttgtcagaag aaaaatatct tcataataaa
     1021 tatgcttttt tactaagatg tatttatgta ttgctaattg tgtttatatg catgtattta
     1081 tatactttga ctccttcaaa gcaatctgag ctgggc
//
