LOCUS       NM_146825               1098 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 7 subfamily D member 9
            (Or7d9), mRNA.
ACCESSION   NM_146825
VERSION     NM_146825.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Rodriguez-Gil,D.J., Treloar,H.B., Zhang,X., Miller,A.M., Two,A.,
            Iwema,C., Firestein,S.J. and Greer,C.A.
  TITLE     Chromosomal location-dependent nonstochastic onset of odor receptor
            expression
  JOURNAL   J Neurosci 30 (30), 10067-10075 (2010)
   PUBMED   20668191
REFERENCE   3  (bases 1 to 1098)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 1098)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 1098)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
REFERENCE   6  (bases 1 to 1098)
  AUTHORS   Carver,E.A., Issel-Tarver,L., Rine,J., Olsen,A.S. and Stubbs,L.
  TITLE     Location of mouse and human genes corresponding to conserved canine
            olfactory receptor gene subfamilies
  JOURNAL   Mamm Genome 9 (5), 349-354 (1998)
   PUBMED   9545490
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC166098.3.
            
            On Sep 9, 2009 this sequence version replaced NM_146825.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            CCDS Note: The coding region has been updated to extend the
            N-terminus to one that is more supported by available conservation
            data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DR065600.1, CB173133.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-134               AC166098.3         69363-69496
            135-1098            AC166098.3         72697-73660
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 7.51 cM"
     gene            1..1098
                     /gene="Or7d9"
                     /gene_synonym="MOR144-1; Olfr39"
                     /note="olfactory receptor family 7 subfamily D member 9"
                     /db_xref="GeneID:258822"
                     /db_xref="MGI:MGI:1313142"
     exon            1..134
                     /gene="Or7d9"
                     /gene_synonym="MOR144-1; Olfr39"
                     /inference="alignment:Splign:2.1.0"
     CDS             127..1086
                     /gene="Or7d9"
                     /gene_synonym="MOR144-1; Olfr39"
                     /note="GA_x6K02T2PVTD-14025733-14026668"
                     /codon_start=1
                     /product="olfactory receptor 39"
                     /protein_id="NP_667036.2"
                     /db_xref="CCDS:CCDS22875.2"
                     /db_xref="GeneID:258822"
                     /db_xref="MGI:MGI:1313142"
                     /translation="MQRREASGMGKENHTELSQFLLLGLSDDPKLQPILFGIFLFMYL
                     VTVLGNLLIILAVSSDSHLHNPMYFFLSNLSFVDMCFTSTTVPKMLVNIQTKNKNISY
                     MQCLTQVYFFMVFAGMDNFLLTVMAFDRFVAICHPLNYTVIMNPHFCCFLVLMCWIII
                     LSVSLFHSLLMKQLTFSMGTEIPHFFCELAQILRVASSDILINNIALYVATALLCVFP
                     VTGILFSYSQIVSSLLNMSSVVSKYRAFSTCGSHLCVVCLFYGTALGVYLSSAGTDVS
                     QGSTIASVMYTVVTPMLNPFIYSLRNKDVKGALVRILKVYSCP"
     exon            135..1098
                     /gene="Or7d9"
                     /gene_synonym="MOR144-1; Olfr39"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acctataatt atattattct agtctccata ataatccatg tgggctttct ggggacaggt
       61 tatggaaata gaaagcctcc atgatggata tctgagagaa tctgtaagtc ctggtcaaga
      121 caatcaatgc aaaggagaga agcctctgga atgggaaaag aaaatcacac agaactatca
      181 caattcctgc tactgggtct ctcagatgat cctaaattgc agcctattct tttcgggata
      241 ttcttattta tgtacctggt cacagtgctt ggtaacctgc tcatcatcct ggctgtcagt
      301 tctgattccc atctccacaa ccccatgtac ttcttcctct ccaacctctc atttgtagac
      361 atgtgtttca cttctaccac tgtcccaaag atgctggtga acatccagac aaagaacaaa
      421 aatatctcct acatgcagtg cctcactcaa gtctattttt ttatggtttt tgctggaatg
      481 gataatttct tactgactgt aatggccttt gaccgctttg tggctatttg tcacccctta
      541 aactacacag tcatcatgaa ccctcacttc tgttgcttcc ttgtgctaat gtgctggatt
      601 atcattttat cagtctccct gtttcatagt ctattaatga agcaattaac tttttccatg
      661 ggtactgaaa tcccacattt cttctgtgag ttggctcaaa ttctcagagt agcaagctct
      721 gatattctca tcaataatat cgcattatat gtggctactg ccctgttatg tgtgtttcct
      781 gtcactggaa ttctcttctc ttactcgcag attgtctcct ccttattgaa tatgtcttca
      841 gtagtcagca agtatagagc cttttccacc tgtggatctc acctctgtgt ggtctgtttg
      901 ttttatggta cagcactggg ggtttacctc agttcagctg ggactgatgt ttctcaagga
      961 agcactatag cctcagtgat gtatactgtg gtcactccta tgctcaaccc attcatctac
     1021 agcctgagga ataaagatgt gaagggggct ctggtaagaa tccttaaagt atattcttgt
     1081 ccctgatgga tcaacacc
//
