LOCUS       NM_207694                978 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 6 subfamily Y member 1
            (Or6y1), mRNA.
ACCESSION   NM_207694 XM_001474930 XM_904768
VERSION     NM_207694.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  AUTHORS   Zhang,X., Rodriguez,I., Mombaerts,P. and Firestein,S.
  TITLE     Odorant and vomeronasal receptor genes in two mouse genome
            assemblies
  JOURNAL   Genomics 83 (5), 802-811 (2004)
   PUBMED   15081110
REFERENCE   3  (bases 1 to 978)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 978)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 978)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113056.26.
            
            On or before Oct 25, 2009 this sequence version replaced
            XM_904768.2, XM_001474930.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-978               AC113056.26        108633-109610
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 81.01 cM"
     gene            1..978
                     /gene="Or6y1"
                     /gene_synonym="EG546747; MOR103-13P; MOR103-17; Olfr220;
                     Olfr220-ps1; Olfr413-ps1"
                     /note="olfactory receptor family 6 subfamily Y member 1"
                     /db_xref="GeneID:546747"
                     /db_xref="MGI:MGI:3030054"
     CDS             1..978
                     /gene="Or6y1"
                     /gene_synonym="EG546747; MOR103-13P; MOR103-17; Olfr220;
                     Olfr220-ps1; Olfr413-ps1"
                     /note="olfactory receptor MOR103-13P; olfactory receptor
                     413, pseudogene 1; olfactory receptor 220, pseudogene 1;
                     GA_x6K02T2P20D-20731742-20730694; GA_x6K02SYWY4V-595-239"
                     /codon_start=1
                     /product="olfactory receptor 220"
                     /protein_id="NP_997577.1"
                     /db_xref="CCDS:CCDS48458.1"
                     /db_xref="GeneID:546747"
                     /db_xref="MGI:MGI:3030054"
                     /translation="MVIKGLQVDNWTETTHFVLLGFPSRPAFQFLLFSVFLVTYLLTL
                     AENLLIILAIRSDGQLHKPMYFFLSHLSFLEMWYVTVISPKMLVDFLSKDKSISFNGC
                     MTQLYFFVTFVCTEYILLAVMAFDRYVAICNPLRYPVIMTNQLCGVMAGGCWFCGLMT
                     AMIKMVFIARLRYCGTPHINHYFCDISPLLNVSCEDSSQAELVDFFLALMVIAVPLCV
                     VVTSYAIILVTILKIPSAQGRQKAFSTCASHLTVVTLFYSTTLFTYARPKLMYAYNSN
                     KVVSVLYTVVVPLLNPIIYCLRNRDVKMALKKTILCNRSGSGGDGDFSS"
     exon            1..978
                     /gene="Or6y1"
                     /gene_synonym="EG546747; MOR103-13P; MOR103-17; Olfr220;
                     Olfr220-ps1; Olfr413-ps1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggttatca agggtctgca agtagacaat tggactgaga caacacattt tgttcttctt
       61 ggatttccat cacgaccagc cttccagttt ctgctcttct ctgtcttcct ggtaacctat
      121 ctgctgacac tggcagagaa ccttctcatc atcctggcca tacgcagtga tgggcaactg
      181 cacaagccca tgtacttctt tctaagccac ctctctttcc tagagatgtg gtatgtcact
      241 gtcatcagtc ccaagatgct ggtagacttc ctcagcaagg acaagagcat ctcattcaat
      301 ggctgcatga cacaacttta cttctttgtg acctttgtct gcactgagta catactcctt
      361 gctgtcatgg cctttgatcg ctatgtagcc atttgcaatc cactacgcta ccctgttatt
      421 atgaccaacc agctctgtgg agtaatggct gggggatgct ggttctgtgg gctcatgact
      481 gccatgatca agatggtttt catagctcga ctgcgctact gtggcacacc acacatcaat
      541 cactacttct gtgatatctc tccactcctc aatgtctcct gcgaggactc ctctcaggca
      601 gagctagtag acttcttctt ggccctcatg gtcattgctg tccctctttg tgtggttgtg
      661 acatcttatg ccatcatcct tgtcaccatt ctcaagatcc cgtcagctca gggtcgtcaa
      721 aaggccttct ccacctgtgc ctctcatctg acagttgtaa ctctttttta ctccacaaca
      781 ctttttactt atgcccgtcc taagctcatg tatgcctaca attcaaacaa agtggtgtca
      841 gttctctaca ctgttgttgt tccccttctc aaccccatca tatactgttt gagaaatcgt
      901 gatgtaaaaa tggccctaaa aaagactata ctttgcaata gaagtggttc tgggggagat
      961 ggggatttta gtagttaa
//
