LOCUS       NM_146365               1147 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily T member 9
            (Or5t9), mRNA.
ACCESSION   NM_146365
VERSION     NM_146365.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1147)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1147)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX284685.8.
            
            On Apr 8, 2010 this sequence version replaced NM_146365.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC120867.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1147              BX284685.8         39113-40259
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.86 cM"
     gene            1..1147
                     /gene="Or5t9"
                     /gene_synonym="MOR179-7; Olfr1094"
                     /note="olfactory receptor family 5 subfamily T member 9"
                     /db_xref="GeneID:258362"
                     /db_xref="MGI:MGI:3030928"
     exon            1..1147
                     /gene="Or5t9"
                     /gene_synonym="MOR179-7; Olfr1094"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1071
                     /gene="Or5t9"
                     /gene_synonym="MOR179-7; Olfr1094"
                     /note="olfactory receptor MOR179-7; olfactory receptor
                     179-7; GA_x6K02T2Q125-48321457-48322449; olfactory
                     receptor 1094"
                     /codon_start=1
                     /product="olfactory receptor 5T9"
                     /protein_id="NP_666477.1"
                     /db_xref="CCDS:CCDS16269.1"
                     /db_xref="GeneID:258362"
                     /db_xref="MGI:MGI:3030928"
                     /translation="MSIHSPGYTVRRIPVNNVTDTTMFILTGFTDDADLQVLLFLLFF
                     VIYLFTLIGNLGLVLLVIGDSRLHNPMYYFLSVLSFLDACYSTVVTPKMLVNFISNDK
                     SISYPGCVTEMFLFVTFGTTECFLLAAMAYDRFVAIYNPLLYAVKMSPRVYIPLIIAC
                     YSGGIMHATIHTVATFSLSFCASNEIRHVFCDIPPLLAISCSNTNINQLLLFYCVGSI
                     EIITILIVLVSYSFILFAILKMNSAEGRRKIFSTCGSHLTGVSIYHGTILFMYVRPSS
                     NYALEHDMIVSTFYTIVIPMLNPIIYSLRNKDVKEAMKKIFERNFFMNKVHFKL"
ORIGIN      
        1 aaacacaagc ccaaggatgt gatagtggac atagttcttg aaaggcattg attgatttat
       61 acagtgtgag actcagaaat gtcgatacat tcaccaggtt acactgtacg aagaattcca
      121 gtgaacaatg tgacagacac caccatgttt atactaacag gcttcactga tgacgctgac
      181 ctgcaagtct tgttatttct tctgtttttt gtgatttatc tttttactct cataggcaac
      241 ttaggacttg ttttgcttgt cattggagat tcccggcttc acaatccaat gtattatttt
      301 ttaagtgttt tatcattcct agatgcctgt tattccaccg ttgtcactcc gaagatgttg
      361 gtcaatttta tttcaaatga taaatctatt tcataccctg gttgtgtaac agagatgttt
      421 ctctttgtta cgtttggaac cacagaatgc ttcctgttgg cagcaatggc ttatgatcgc
      481 tttgtagcta tctacaatcc acttctgtat gcagtgaaaa tgtcacctag agtctacata
      541 cctctcatta tagcttgtta ttcaggaggg attatgcatg ctactataca tacagtggct
      601 acctttagcc tttctttctg tgcatccaat gagattaggc atgtcttctg tgatattcct
      661 ccattgcttg ctatttcttg ttcaaacaca aatataaatc agcttctgct cttctattgt
      721 gtaggctcca ttgagatcat caccatcctg attgtcctgg tctcttacag tttcatactc
      781 tttgcaattc ttaagatgaa ttctgcagaa gggaggagaa aaatattctc tacatgtggt
      841 tctcacctta caggagtgtc catttatcat gggacaattc ttttcatgta tgtgagacct
      901 agttccaact atgccttgga acatgacatg attgtgtcca cattttatac cattgtgatt
      961 ccaatgctga atcctatcat ctacagtctg agaaacaaag atgtaaaaga ggcaatgaaa
     1021 aagatttttg agagaaattt cttcatgaac aaagtgcatt ttaaattata ataacactaa
     1081 aaataatgtc cgttgtaaat ctgtatttta caaagaaaag cattccagag ttttgttaat
     1141 ggtggcc
//
