LOCUS       NM_001368206            1233 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily T member 5
            (Or5t5), transcript variant 2, mRNA.
ACCESSION   NM_001368206 XM_011239563
VERSION     NM_001368206.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1233)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1233)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX005136.8.
            
            On Jan 26, 2019 this sequence version replaced XM_011239563.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB174098.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-37                BX005136.8         169182-169218
            38-1233             BX005136.8         172233-173428
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.86 cM"
     gene            1..1233
                     /gene="Or5t5"
                     /gene_synonym="MOR179-6; Olfr1093"
                     /note="olfactory receptor family 5 subfamily T member 5"
                     /db_xref="GeneID:258363"
                     /db_xref="MGI:MGI:3030927"
     exon            1..37
                     /gene="Or5t5"
                     /gene_synonym="MOR179-6; Olfr1093"
                     /inference="alignment:Splign:2.1.0"
     exon            38..1233
                     /gene="Or5t5"
                     /gene_synonym="MOR179-6; Olfr1093"
                     /inference="alignment:Splign:2.1.0"
     CDS             174..1142
                     /gene="Or5t5"
                     /gene_synonym="MOR179-6; Olfr1093"
                     /note="olfactory receptor MOR179-6;
                     GA_x6K02T2Q125-48278396-48279364"
                     /codon_start=1
                     /product="olfactory receptor 1093"
                     /protein_id="NP_001355135.1"
                     /db_xref="CCDS:CCDS16268.1"
                     /db_xref="GeneID:258363"
                     /db_xref="MGI:MGI:3030927"
                     /translation="MEKITSAVDVHNIPLKNMTEATMFILLGFTDDFELQVFLFLLFL
                     AIYLFTLVGNFGLVVLVIGDCRLHNPMYYFLSVLSFLDACYSTVVTPKMLVNFLSENK
                     SISFLACATQMLLFVSLGTTECFLLAAMAYDRYVAIYNPLLYTVAMSPRVYLPLIIAS
                     YAGGVVHGAIHTVATFSLSFCGSNEIKHVFCDIPALLALSCSDTHTNELLVLYLVGLI
                     EIVTILIVLVSYGFILFAILNMHSAEGRRKVFSTCGSHLTGVSIYHGTILFTYMRPSS
                     SYASNHDMVVSIFYTIVIPMLNPIIYSLRNKDVKVAFNKLWRKCDS"
ORIGIN      
        1 cttgaccatt atctaactga ccaagcagct caatttttga aatctctaca atttcatcaa
       61 attatttatc attgtccttc tcattaccct atggtagtca cgatgcccta agaatcaaac
      121 atggacacag ctttatagga acttcctggg gaaatatata aataaaaacc agaatggaaa
      181 agatcacatc agctgtggat gtccacaata ttccattaaa gaacatgact gaagccacca
      241 tgtttattct cttaggattc acagatgact ttgaactcca agtcttcctg tttttactgt
      301 ttcttgctat ttatctcttc actctggtag gaaactttgg actggttgtt ttggtcattg
      361 gggattgtcg gctacacaac cccatgtact atttcctaag tgttttgtct ttcctggatg
      421 cttgctattc tacagttgtt acacccaaaa tgttggtcaa ctttctaagt gaaaataagt
      481 ccatttcatt ccttgcatgt gcaacccaaa tgcttctctt tgtttcgttg ggaaccacag
      541 aatgctttct cctggcagca atggcttatg accgatatgt agccatctac aacccacttc
      601 tgtatacagt ggccatgtca cccagagtat acctgccact catcattgct tcctatgctg
      661 gtggagttgt gcatggtgct atccacacag tggccacttt cagtctgtcc ttctgtggat
      721 ccaatgaaat taagcatgtc ttctgtgaca tccctgcatt gcttgctctt tcttgttctg
      781 atacccacac aaatgagctt ctagtcttgt acttggtggg cttgattgag attgttacca
      841 tcctgattgt tctggtctcc tatggattca tcctctttgc cattctgaac atgcattctg
      901 ctgagggtag gaggaaagtg ttctctacat gtggctctca cctcactgga gtctctattt
      961 accatggtac aatccttttc acttatatga ggcctagttc cagttatgct tcaaatcatg
     1021 acatggtagt gtcaatattt tacaccattg tgatacccat gttgaatcct atcatctata
     1081 gtttgaggaa caaagatgta aaagtagcat ttaataaatt gtggagaaaa tgtgattcat
     1141 aattaatgta tagttatata acaaaacaaa attactttgt ttattccaat ttacatgaaa
     1201 tatacattgc tacaaattac aaacatgccc tgg
//
