LOCUS       NM_146588                990 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily M member 5
            (Or5m5), mRNA.
ACCESSION   NM_146588
VERSION     NM_146588.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 990)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 990)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 990)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928839.10.
            
            On Feb 25, 2010 this sequence version replaced NM_146588.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB174013.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                AL928839.10        9013-9040
            29-990              AL928839.10        13538-14499
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.69 cM"
     gene            1..990
                     /gene="Or5m5"
                     /gene_synonym="MOR196-2; Olfr1030"
                     /note="olfactory receptor family 5 subfamily M member 5"
                     /db_xref="GeneID:258581"
                     /db_xref="MGI:MGI:3030864"
     exon            1..28
                     /gene="Or5m5"
                     /gene_synonym="MOR196-2; Olfr1030"
                     /inference="alignment:Splign:2.1.0"
     exon            29..990
                     /gene="Or5m5"
                     /gene_synonym="MOR196-2; Olfr1030"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..990
                     /gene="Or5m5"
                     /gene_synonym="MOR196-2; Olfr1030"
                     /note="olfactory receptor MOR196-2; olfactory receptor
                     196-2; GA_x6K02T2Q125-47462755-47463693; olfactory
                     receptor 1030"
                     /codon_start=1
                     /product="olfactory receptor 5M5"
                     /protein_id="NP_666799.1"
                     /db_xref="CCDS:CCDS16231.1"
                     /db_xref="GeneID:258581"
                     /db_xref="MGI:MGI:3030864"
                     /translation="MLAPKKMVRGNYSMVTEFILLGLTDRPELQPLLFVLFLVIYLIT
                     VGGNLGMMVLIRIDSRLHTPMYYFLASLSCLDLCYSTNVTPKMLVNFLSEKKTISYAA
                     CLVQCYFFIAMVITEYYMLAVMAYDRYMAICNPLLYSSKMSKGVCVRLIAGPYIYGFL
                     SGLMETMWTYRLTFCGSNIINHFYCADPPLIRLSCSDTFIKETSMFVVAGFNLSNSLF
                     IILISYLFILIAILRMRSAEGRRKAFSTCGSHLVAVTVFYGTLFCMYVRPPTDKSVEQ
                     SKIIAVFYTFVSPMLNPIIYSLRNKDVKHAFWKLVRRNVLSK"
ORIGIN      
        1 tttctgtgag aagttttcct gaattcagtg aacatgctgg cacctaagaa aatggtcaga
       61 ggcaattact ccatggtgac tgaatttatt ctcttgggat taactgatcg tccagagctg
      121 cagcctttgc tttttgtgct cttcctggtg atctatctga tcactgtggg agggaatctt
      181 ggcatgatgg tgttgatcag gatagattcc cgcctgcata ccccaatgta ctactttctt
      241 gccagtttgt catgtttgga tttgtgctat tctaccaatg tgactcccaa gatgctggtg
      301 aactttttat cagagaagaa aaccatttca tatgctgcgt gtttagtcca gtgttatttt
      361 ttcattgcta tggtgattac tgaatattac atgctagctg tgatggccta tgacaggtat
      421 atggccatct gtaacccttt gctttacagt agcaagatgt ccaaaggtgt atgtgtgcgt
      481 ctgattgctg gtccctatat ctatggcttc cttagtggcc tgatggaaac catgtggaca
      541 tatcgcttga ccttctgtgg ctccaatatc atcaaccact tctactgcgc tgaccctcca
      601 ctcatcagac tctcctgctc tgacacattc attaaggaaa catcaatgtt tgtagtagca
      661 ggatttaacc tctccaactc cctgttcata atcctcattt cctacctgtt cattctcatt
      721 gccatcttga ggatgcgttc tgctgaaggt aggcgcaaag ccttttccac ctgtggatct
      781 catctggtgg cagtgactgt gttttatggg acgctattct gcatgtatgt tagacctccc
      841 acagataaat cagtggagca gtccaaaatt attgctgtgt tctatacttt cgtaagtccc
      901 atgttgaacc ccatcattta tagtctgagg aataaggatg tgaaacatgc tttttggaag
      961 ctggtcagaa gaaatgtgct ttcaaagtaa
//
