LOCUS       NM_001011662            1142 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily K member 16
            (Or5k16), mRNA.
ACCESSION   NM_001011662
VERSION     NM_001011662.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1142)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1142)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB173326.1 and AC154545.2.
            
            On Nov 24, 2009 this sequence version replaced NM_001011662.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB173553.1, CB173326.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-498               CB173326.1         1-498
            499-1142            AC154545.2         98035-98678         c
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 34.83 cM"
     gene            1..1142
                     /gene="Or5k16"
                     /gene_synonym="MOR184-11P; MOR184-9; Olfr1563-ps1;
                     Olfr180"
                     /note="olfactory receptor family 5 subfamily K member 16"
                     /db_xref="GeneID:258178"
                     /db_xref="MGI:MGI:3030014"
     exon            1..178
                     /gene="Or5k16"
                     /gene_synonym="MOR184-11P; MOR184-9; Olfr1563-ps1;
                     Olfr180"
                     /inference="alignment:Splign:2.1.0"
     exon            179..1142
                     /gene="Or5k16"
                     /gene_synonym="MOR184-11P; MOR184-9; Olfr1563-ps1;
                     Olfr180"
                     /inference="alignment:Splign:2.1.0"
     CDS             189..1142
                     /gene="Or5k16"
                     /gene_synonym="MOR184-11P; MOR184-9; Olfr1563-ps1;
                     Olfr180"
                     /note="olfactory receptor MOR184-9; olfactory receptor
                     MOR184-11P; olfactory receptor 1563, pseudogene 1;
                     olfactory receptor Olfr180;
                     GA_x54KRFPKG5P-55134972-55134019; olfactory receptor 180"
                     /codon_start=1
                     /product="olfactory receptor 5K16"
                     /protein_id="NP_001011662.2"
                     /db_xref="CCDS:CCDS28239.1"
                     /db_xref="GeneID:258178"
                     /db_xref="MGI:MGI:3030014"
                     /translation="MEKTNHSLTTQFILVGFSDHPDLKTPLFLLFSVIYLVTMVGNLG
                     LVAVIYLEPRLHTPMYIFLGNLALMDSCCSCAITPKMLENFFSVDRRISLYECMAQFY
                     FLCLAETADCFLLAAMAYDRYVAICNPLQYHSMMSKKLSIQMSIGTFITSNLHSLIHV
                     GCLLRLTFCKSNRIDHFFCDILPLYRLSCTDPFINELMIYIFSMPIQVFTITTVLVSY
                     FCILLTIFKMKSKDGRGKAFSTCASHFFSVSIFYVCLLMYIRPFDEGNKDIPVAVFYT
                     IIIPLLNPFIYSLRNKEVVNAVKKVMKTHSIFKNASASMAR"
ORIGIN      
        1 tttaagttca ttcctacata tgaagaagga aatctaaaat acttaagctc ttatttttac
       61 attgtatctg cttatgtttg gtttgtctca aaattggaga gatactgaaa gataaaatga
      121 agcagtaagt gtccattctg agaacaaaag caccaaaggt ttgtgaacaa acaaacagag
      181 aaatcagaat ggagaagaca aatcactctt tgaccacaca gttcatcctg gtgggattct
      241 cagatcaccc agacttgaag acacctctgt tcctgctgtt ctctgtcatc tatctggtca
      301 ccatggtggg gaatcttggg ctggtggccg tgatctactt ggagcctcgt ctccacacac
      361 ccatgtacat ctttctgggc aacctggctc tgatggactc ctgctgctcc tgtgccatca
      421 ctcccaagat gctagagaac ttcttttctg tagacagaag gatttctctc tatgaatgca
      481 tggcacagtt ctattttctg tgtcttgctg aaactgcaga ctgctttctt ctggcagcaa
      541 tggcctatga ccgctatgtg gccatatgca accctctgca gtaccacagc atgatgtcca
      601 agaaactctc cattcagatg agtataggca cattcataac cagtaacctg cattccttga
      661 ttcatgtagg gtgtctctta aggttaactt tctgtaaatc taacagaatt gatcatttct
      721 tctgtgatat tcttccccta tatagactct cctgtacaga cccatttatc aatgaattaa
      781 tgatatatat tttttctatg ccaattcaag tcttcaccat taccactgtc ttggtctctt
      841 acttctgcat tcttctcact attttcaaga tgaaatccaa ggatgggaga ggaaaagcat
      901 tttctacctg tgcatcccac tttttttctg tgtcaatatt ctacgtctgt cttcttatgt
      961 atattagacc atttgacgaa ggtaataaag acataccagt ggctgtattt tatacaataa
     1021 taattccttt gctaaaccct tttatttaca gcctgagaaa taaggaggta gtaaatgctg
     1081 ttaagaaagt tatgaaaact catagtattt ttaaaaatgc ttcagcttct atggcacgct
     1141 aa
//
