LOCUS       NM_147010                939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily J member 3
            (Or5j3), mRNA.
ACCESSION   NM_147010
VERSION     NM_147010.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 939)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 939)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL935138.7.
            
            On Feb 25, 2010 this sequence version replaced NM_147010.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC127979.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               AL935138.7         39477-40415
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.77 cM"
     gene            1..939
                     /gene="Or5j3"
                     /gene_synonym="MOR172-1; Olfr1052"
                     /note="olfactory receptor family 5 subfamily J member 3"
                     /db_xref="GeneID:259012"
                     /db_xref="MGI:MGI:3030886"
     CDS             1..939
                     /gene="Or5j3"
                     /gene_synonym="MOR172-1; Olfr1052"
                     /note="olfactory receptor MOR172-1; olfactory receptor
                     1052; olfactory receptor 172-1;
                     GA_x6K02T2Q125-47777498-47778436"
                     /codon_start=1
                     /product="olfactory receptor 5J3"
                     /protein_id="NP_667221.2"
                     /db_xref="CCDS:CCDS16250.1"
                     /db_xref="GeneID:259012"
                     /db_xref="MGI:MGI:3030886"
                     /translation="MATENCTVVTEFILLGLTDRAELKMMLFVLFLVIYAVTLLGNLG
                     MILLIRITPKLHTPMYFFLSCLSFVDACYSSVIAPKMLISFLVVTETISFSACIMQHL
                     FFGVLVTTEGFLLSVMAYDRYVAVVNPLLYTVSMSKQKCIMMVTGSVIGGTINSLTHT
                     ISLSKLSFCGPNIVGHFFCDIPSLLILSCSDTSMNEFLLLIFSGVIAIGTLLIVFISY
                     LLIALAILRIRSASGRQKAFSTCASHLTAVTIFYGTLSFNYIQPSSQYSVEQEKVVSV
                     FYTLVIPMLNPMIYSLRNKEVKEAAKRAIEMKSFSC"
     exon            1..939
                     /gene="Or5j3"
                     /gene_synonym="MOR172-1; Olfr1052"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctactg agaactgtac agttgttact gagttcattc ttttaggact gactgatcgt
       61 gctgaattga aaatgatgct ctttgtttta tttctggtga tttatgctgt taccttgtta
      121 gggaatctgg gcatgattct gttaatccgc attactccca aactccacac accaatgtac
      181 tttttcctca gttgcctatc atttgtagat gcctgttatt catcagtcat tgcaccaaaa
      241 atgttgatta gtttcttggt agtaacagaa accatctctt tctctgcctg catcatgcaa
      301 catttatttt tcggagtgct ggttaccacc gaaggcttct tgctgtcagt gatggcttat
      361 gaccgttatg tggcagttgt taacccattg ctgtatactg tgtccatgtc taagcaaaag
      421 tgtatcatga tggtcactgg gtcagtcata ggtggaacta ttaactcttt gacacacacc
      481 ataagtttga gtaagctgtc tttttgtgga cctaatatag tgggtcactt cttctgtgac
      541 ataccatcgc tgctgatact ctcatgttct gatacctcca tgaatgaatt tctgctcttg
      601 atcttctctg gagttatcgc cattggtact ctcttgattg tgttcatatc ctatttactc
      661 attgctctgg ccattttgag aatacgctca gcttctggac gacaaaaagc cttctccact
      721 tgtgcttctc acctgactgc tgtcactatc ttctatggca ccttaagctt taattacatt
      781 cagccaagct cccagtattc tgtagaacaa gagaaggtgg tgtcggtgtt ctatacactg
      841 gtgattccta tgttaaatcc catgatttac agtctcagga acaaagaggt gaaagaagct
      901 gcaaagagag ccatagagat gaagtccttc tcatgttaa
//
