LOCUS       NM_146531                939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily D member 40
            (Or5d40), mRNA.
ACCESSION   NM_146531
VERSION     NM_146531.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Zhang,X., Rogers,M., Tian,H., Zhang,X., Zou,D.J., Liu,J., Ma,M.,
            Shepherd,G.M. and Firestein,S.J.
  TITLE     High-throughput microarray detection of olfactory receptor gene
            expression in the mouse
  JOURNAL   Proc Natl Acad Sci U S A 101 (39), 14168-14173 (2004)
   PUBMED   15377787
REFERENCE   3  (bases 1 to 939)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 939)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 939)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC104084.2.
            
            On Jan 1, 2010 this sequence version replaced NM_146531.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC104084.2 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               BC104084.2         1-939
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.98 cM"
     gene            1..939
                     /gene="Or5d40"
                     /gene_synonym="MOR174-13; Olfr1168"
                     /note="olfactory receptor family 5 subfamily D member 40"
                     /db_xref="GeneID:258524"
                     /db_xref="MGI:MGI:3031002"
     CDS             1..939
                     /gene="Or5d40"
                     /gene_synonym="MOR174-13; Olfr1168"
                     /note="olfactory receptor MOR174-13;
                     GA_x6K02T2Q125-49669483-49670421"
                     /codon_start=1
                     /product="olfactory receptor 1168"
                     /protein_id="NP_666742.2"
                     /db_xref="CCDS:CCDS16328.1"
                     /db_xref="GeneID:258524"
                     /db_xref="MGI:MGI:3031002"
                     /translation="MINQSSVTTFILVGFSEYPHLQPPLFLMIMTIYTVTLVGNVGII
                     LVRRINPKLHTPMYFFLSHLSFLDICYSSVFTPKLLEILIVEHRTISLNGCMTQFFFG
                     CACVITEMFMLAVMAYDRFVAVCNPLLYTVAMSHQLCALLVAGSYMWGGLCAVIITYT
                     LVELSYCEPGIIDHFGCEYSAIVSVSCSDPSFSQMVCLVISILSEGSSLLITMASYVF
                     IVVTIIKMPSKDGLRKAFSTCTSHLTAISIFHGIILLLYCIPNAKSSKLLVKVATVLY
                     TVLIPMLNPLIYSLRNKDVKETVKRLISSKLHSQTI"
     exon            1..939
                     /gene="Or5d40"
                     /gene_synonym="MOR174-13; Olfr1168"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgataaacc agagttctgt aaccacattt attctggtgg gtttctcaga atatccacac
       61 ctacagccac ccctcttcct tatgataatg accatttaca cagtcactct ggtaggaaat
      121 gtaggcataa ttttggtcag aaggatcaac cctaagcttc acacacccat gtactttttt
      181 ctgagccatc tttcattttt ggatatatgt tattctagtg tatttacacc aaaattgtta
      241 gagatcttga ttgtggaaca tagaactatt tctttaaatg gttgcatgac acagtttttc
      301 tttggctgtg catgtgtgat tacagagatg ttcatgttag cagtgatggc ctatgacagg
      361 tttgtggctg tttgcaaccc cctgctctat actgttgcta tgtctcatca attgtgtgct
      421 ctcctagtag ctggaagtta tatgtgggga ggtctgtgtg ctgtgataat cacatacact
      481 cttgtagagc tctcttattg tgaacctggc atcattgatc actttggctg tgaatattca
      541 gccattgtct ctgtatcctg ttctgacccc tccttcagcc agatggtatg cttagtcatt
      601 tccatattaa gtgagggtag tagccttctt atcactatgg cctcctatgt cttcatcgtt
      661 gtcacaatca tcaagatgcc ttctaaagat ggactcagaa aagccttctc cacctgtact
      721 tcacacctga ctgccatcag catcttccat gggattattc tccttctcta ctgtataccc
      781 aatgcaaaga gctcaaagct gctggtcaaa gtagcaactg tactctatac agtccttata
      841 cccatgctga accccctcat ctacagccta aggaacaaag atgtaaaaga gacagtcaag
      901 aggctcatca gctcaaaatt gcactctcag acaatataa
//
