LOCUS       NM_146294               1100 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily D member 39
            (Or5d39), mRNA.
ACCESSION   NM_146294
VERSION     NM_146294.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1100)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1100)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL935055.8.
            
            On Aug 22, 2009 this sequence version replaced NM_146294.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC137817.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1100              AL935055.8         151907-153006       c
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.98 cM"
     gene            1..1100
                     /gene="Or5d39"
                     /gene_synonym="MOR174-16; Olfr1167"
                     /note="olfactory receptor family 5 subfamily D member 39"
                     /db_xref="GeneID:258291"
                     /db_xref="MGI:MGI:3031001"
     exon            1..1100
                     /gene="Or5d39"
                     /gene_synonym="MOR174-16; Olfr1167"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..1017
                     /gene="Or5d39"
                     /gene_synonym="MOR174-16; Olfr1167"
                     /note="olfactory receptor MOR174-16;
                     GA_x6K02T2Q125-49641892-49640942"
                     /codon_start=1
                     /product="olfactory receptor 1167"
                     /protein_id="NP_666406.2"
                     /db_xref="CCDS:CCDS16327.1"
                     /db_xref="GeneID:258291"
                     /db_xref="MGI:MGI:3031001"
                     /translation="MAYEVVNQSSATTFILVGFSEYPQLQIPLFLLFLTIYSVTLMGN
                     LGILVVIKVNPKLHTPMYFFLSHLSFLDICYSSVFTPKLLQILIMEDRTISFIGCMIQ
                     FFFICTFVITEMFMLAVMAYDRFVAVCNPLLYTVVMPIQFCALLVAGTYMIGGLCTLI
                     ILYTLLQLCYFEYGIINHFGCEYSAVISVSCSDSSFSQLICLVISIASEFSSVLITLA
                     SYVFIVVTIIKMPSKGGLRKAFSTCTSHLTAITIFHGILLLLYCIPNSNSSRLFVKVA
                     TALYTIMIPMLNPLIYSLRNKDVKDTVRRLISSKLHSHLT"
ORIGIN      
        1 tgctccactc tctccagttc cataagtctc attttctctt cttcctcatg tttaatctgg
       61 aaagtgatgg cttatgaagt ggtgaatcag agttctgcta ccacattcat cttggtcggt
      121 ttctcagaat atccacagct ccaaataccc ctcttcctcc tgttcttgac catctactca
      181 gtaacactga tggggaacct gggcatactt gtggttataa aggttaatcc caaacttcac
      241 actccaatgt acttttttct tagccaccta tcatttttgg atatatgtta ttctagtgta
      301 tttacaccca aacttttgca gatcttgatt atggaagata ggacgatttc ttttattgga
      361 tgcatgatac aatttttctt tatttgtaca ttcgtgatta cagaaatgtt catgttagca
      421 gtgatggcct atgacaggtt tgtggctgtt tgtaatccct tactctacac agttgtaatg
      481 cctatacaat tctgtgctct gctagtagct gggacatata tgatcggtgg actatgtact
      541 ttgataattc tatatactct tttgcaactc tgttattttg aatatggcat catcaatcac
      601 tttggctgtg aatactctgc tgtcatctct gtgtcttgct ctgactcctc ctttagccag
      661 ttgatatgct tagtcatatc tattgctagt gaattttcta gtgtcctgat cactttagcc
      721 tcatatgtgt tcatagttgt cactattata aagatgcctt ccaaaggagg actgagaaaa
      781 gccttctcca cctgtacttc ccacttgact gccataacaa ttttccatgg gatcttactc
      841 ctcctatact gtattcccaa ctcaaacagc tcacggctct ttgtcaaagt ggccactgct
      901 ctttatacaa tcatgatccc catgttgaac ccccttatct atagccttag aaataaagat
      961 gtgaaggaca cagtcaggag acttatcagc tcaaaacttc actctcactt gacatagtta
     1021 tgaatactgt aggatgtgtg tatgtgtgta tatgtgtgtg tttttatgta gacacaggaa
     1081 gaggcccaca ctgaagcaga
//
