LOCUS       NM_146593                940 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AS member 1
            (Or5as1), mRNA.
ACCESSION   NM_146593
VERSION     NM_146593.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 940)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 940)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928801.6.
            
            On Aug 22, 2009 this sequence version replaced NM_146593.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC104069.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-940               AL928801.6         78935-79874         c
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.86 cM"
     gene            1..940
                     /gene="Or5as1"
                     /gene_synonym="MOR181-2; Olfr1111"
                     /note="olfactory receptor family 5 subfamily AS member 1"
                     /db_xref="GeneID:258586"
                     /db_xref="MGI:MGI:3030945"
     exon            1..940
                     /gene="Or5as1"
                     /gene_synonym="MOR181-2; Olfr1111"
                     /inference="alignment:Splign:2.1.0"
     CDS             1..939
                     /gene="Or5as1"
                     /gene_synonym="MOR181-2; Olfr1111"
                     /note="olfactory receptor MOR181-2;
                     GA_x6K02T2Q125-48635468-48634530"
                     /codon_start=1
                     /product="olfactory receptor 1111"
                     /protein_id="NP_666804.2"
                     /db_xref="CCDS:CCDS16283.1"
                     /db_xref="GeneID:258586"
                     /db_xref="MGI:MGI:3030945"
                     /translation="MQYTNYTKPTEFIFIGFTDYQPLRLMLFLVFFIVYTLTLVGNIG
                     LIILVNIDLSLQTPMYHFLSNLSFLDISYSTAIAPKMLVDFLASKKSISFCGCAIQMF
                     FFACFADAECLILAAMAYDRYAAICNPLLYSTLVSRRVCFSFVVLAYFSGSVTSLVHV
                     SLAFMLPYCRSNIVNHFFCDIPPLLALSCADTHINELLLFALCGTIQTSTFMVILISY
                     SCILITVLSIKSTGGRSKTFSTCASHLIAVTLFYGTLLFMYLRPTTSYSPDTDKVVAL
                     FYTVVFPMLNPIIYSFRNKDVKNALKKLFDRLGIFR"
ORIGIN      
        1 atgcagtata caaactatac caagccaaca gagtttatat ttatcggatt tacagattac
       61 cagccattaa gactcatgct atttttggtg tttttcatag tttacacctt aactttggtg
      121 ggaaatattg gcttaataat cctagttaat attgacttaa gccttcaaac tcccatgtat
      181 cactttctta gcaatctgtc tttcttagat atcagctatt ctacagccat tgcacctaaa
      241 atgctggtag acttcttagc ctccaagaag agcatctcat tctgtggatg tgctatacag
      301 atgtttttct ttgcatgctt tgcagatgct gagtgcctta tcctggctgc aatggcatac
      361 gaccgctatg cagccatttg caacccactg ctttactcta cattggtgtc tcgaagggtc
      421 tgcttcagct ttgttgtgtt ggcttatttt agcggaagcg tgacctcact ggtgcatgta
      481 tcccttgcat ttatgcttcc atactgtagg tccaatattg tcaaccactt tttttgtgat
      541 atcccacctc tccttgcttt atcatgtgca gatactcata ttaatgagct tctgctcttt
      601 gctttatgtg gtacaatcca gaccagcact ttcatggtca tccttatttc ttactcttgc
      661 atcctcatta ctgttttgag catcaagtcc acaggaggca ggagcaaaac attttccact
      721 tgtgcttctc atctcatagc agtcaccttg ttctatggaa cactgctgtt tatgtacttg
      781 cgtcccacca ctagctattc cccagacact gataaggtag ttgctttgtt ttacactgtt
      841 gtatttccta tgttgaatcc aataatttac agcttcagaa ataaggatgt gaaaaatgca
      901 ttaaaaaaat tgtttgatag actggggatc ttcagatgaa
//
