LOCUS       NM_146766                939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AQ member 6
            (Or5aq6), mRNA.
ACCESSION   NM_146766
VERSION     NM_146766.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 939)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 939)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928801.6.
            
            On Jul 25, 2006 this sequence version replaced NM_146766.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data because no single transcript from the same strain was
            available for the full length of the gene.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               AL928801.6         21672-22610         c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.86 cM"
     gene            1..939
                     /gene="Or5aq6"
                     /gene_synonym="MOR172-5; Olfr1109"
                     /note="olfactory receptor family 5 subfamily AQ member 6"
                     /db_xref="GeneID:258762"
                     /db_xref="MGI:MGI:3030943"
     CDS             1..939
                     /gene="Or5aq6"
                     /gene_synonym="MOR172-5; Olfr1109"
                     /note="olfactory receptor MOR172-5;
                     GA_x6K02T2Q125-48586461-48585523"
                     /codon_start=1
                     /product="olfactory receptor 1109"
                     /protein_id="NP_666977.2"
                     /db_xref="CCDS:CCDS16280.1"
                     /db_xref="GeneID:258762"
                     /db_xref="MGI:MGI:3030943"
                     /translation="MDPGNHTVVKEFILLGLTENPDWQIPLFLLFSIIYLIIFVGNWG
                     MIFLIWLNAHLHTPMYFFLSNLSFCDICYSTVIAPKMLINIVSEHKSSRLLSCVLQSF
                     FFMVYATTEVILLSMMAYDRYVAIVNPLMYTVIMTFSICISMVLACYLCGIINSLTHT
                     ISLLRLDFCGPNVVNHFFCDVPPLLKLSCSDAHINEMLLLVFSGVIAIFTFIIVMVSY
                     IHIIIAILKIRSTEGRRKAFSTCASHLTAVTLFYGSGTFSYIQPSSQYSMEQEKVSAV
                     FYTLVIPMLNPLIYSLRNKDVKEAAKKLICGWSNTS"
     exon            1..939
                     /gene="Or5aq6"
                     /gene_synonym="MOR172-5; Olfr1109"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggacccag ggaatcatac agttgtgaag gaattcatac tccttggctt aacagaaaat
       61 cccgattggc agattcctct ctttttgctt ttcagcataa tttatttaat catttttgtg
      121 ggtaactggg gaatgatctt cttgatctgg ttgaatgccc accttcatac cccaatgtac
      181 ttctttctta gtaacctctc tttctgtgat atctgctact ctactgtcat tgctcctaag
      241 atgctcatca atatcgtatc agaacacaaa tctagtagac tcctttcttg tgttttgcag
      301 agtttctttt ttatggtgta tgcaaccaca gaagtcatcc tcctgtctat gatggcttat
      361 gatcgctatg tggcaattgt aaacccctta atgtatacag ttattatgac attcagcatc
      421 tgtattagca tggttcttgc atgttacttg tgtggcatca ttaattccct gactcacaca
      481 ataagtctac tgagactgga cttctgtggt cccaacgttg tgaatcactt cttctgtgat
      541 gttcctcctc ttttgaagct ttcatgttct gatgcacaca tcaatgagat gctgctttta
      601 gtcttctctg gagtgattgc tattttcact ttcatcattg tcatggtgtc ctatattcac
      661 attatcattg ccattctgaa aatccgctca actgagggga ggcgtaaagc cttctccact
      721 tgcgcctcac acctgacagc tgtgacatta ttttatggtt ctggaacatt tagttatatc
      781 cagcccagct ctcagtactc catggaacag gaaaaagtct ctgctgtgtt ttacaccttg
      841 gtcatcccta tgttgaatcc tctgatttac agcctgagga acaaggatgt gaaggaagca
      901 gcaaagaagt tgatttgtgg gtggagtaac acctcttga
//
