LOCUS       NM_146769               1384 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AQ member 1
            (Or5aq1), mRNA.
ACCESSION   NM_146769 XM_006499560
VERSION     NM_146769.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1384)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1384)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928801.6 and CB172909.1.
            
            On or before Jan 31, 2019 this sequence version replaced
            XM_006499560.1, NM_146769.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB172930.1, CB173030.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-76                AL928801.6         69373-69448         c
            77-723              CB172909.1         1-647
            724-1384            AL928801.6         64596-65256         c
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.86 cM"
     gene            1..1384
                     /gene="Or5aq1"
                     /gene_synonym="MOR172-4; Olfr1110"
                     /note="olfactory receptor family 5 subfamily AQ member 1"
                     /db_xref="GeneID:258765"
                     /db_xref="MGI:MGI:3030944"
     exon            1..342
                     /gene="Or5aq1"
                     /gene_synonym="MOR172-4; Olfr1110"
                     /inference="alignment:Splign:2.1.0"
     exon            343..1384
                     /gene="Or5aq1"
                     /gene_synonym="MOR172-4; Olfr1110"
                     /inference="alignment:Splign:2.1.0"
     CDS             446..1384
                     /gene="Or5aq1"
                     /gene_synonym="MOR172-4; Olfr1110"
                     /note="olfactory receptor MOR172-4;
                     GA_x6K02T2Q125-48621299-48620361"
                     /codon_start=1
                     /product="olfactory receptor 1110"
                     /protein_id="NP_666980.1"
                     /db_xref="CCDS:CCDS16282.1"
                     /db_xref="GeneID:258765"
                     /db_xref="MGI:MGI:3030944"
                     /translation="MAIWNHTGVSEFILVGLTENPNWQVPLFLLFSVVYFIILVGNWG
                     MIILIWLNAQLHTPMYFFLSNLSFCDICYSTIIAPKMLLNFLSEHKSSTFFACILQSF
                     FFAVYVTTEVILLSMMAYDRYVAIANPLMYTVIMTHNICTQMVLASYLGGLINSMIHT
                     IGLLKLDFCGPNIVNHFFCDVPPLLKLACSDAHINEMLLLVFSGMIAIFTFIIIMVSY
                     IHIIIAILRIRSAEGRRKAFSTCASHLTAVTLFYGSLTFNYIQPSSQYSMEQEKLSAM
                     FYTLVIPMLNPLIYSLRNKDVKEAAKRLICRESSTS"
ORIGIN      
        1 aacttctatg ggcaatccta ttataaagat caagtcctta aagacttgca gaagccagct
       61 cttgtatggc agatgtcttg ttctgagctt tgttatgttg aaagaaagaa agtgttaagt
      121 ttccattttc agattttgat gttttctgtt atttccaaaa cgctaaagga aactcattac
      181 cagttatcca agtatagtac tatacttaaa cagcatagaa cattatatta taatttgtgg
      241 attatatatc tttcaacctt ccagatctca tagacgaaag cattatttac ccaatgcttg
      301 tacacttaca ttaaatctat attcactatt ttctagcata tgggcaactc ttcatgacca
      361 tgatggttat cagattctgg agaaaatcct ttttatagtc cttaagtgaa gtgactattt
      421 tggaattaag tagactactg aaaacatggc aatttggaat catacaggtg tgagtgaatt
      481 cattctggta ggcctgactg aaaatcctaa ttggcaggtt cctctcttct tgcttttcag
      541 tgtagtgtat ttcatcattc ttgtaggtaa ctggggaatg attatcttga tctggttgaa
      601 tgcccaactt catacaccaa tgtacttttt ccttagtaac ctttctttct gtgatatctg
      661 ctactctact atcattgctc caaagatgct gctcaatttc ttgtcagaac acaagtctag
      721 tacattcttt gcctgtattc tgcagagttt cttttttgca gtttatgtaa cgacagaagt
      781 aatcctcctg tctatgatgg cctatgatcg ctatgtggca attgcaaatc ccttaatgta
      841 tacggttatc atgacacaca acatctgcac tcaaatggtt cttgcaagtt acttgggggg
      901 cctcataaat tccatgattc atacaatagg tttactcaaa ctagacttct gtggtccaaa
      961 tattgtgaat cacttcttct gtgatgttcc tcctcttttg aagcttgcat gctctgatgc
     1021 acacatcaat gagatgctgc ttttggtctt ctctggaatg attgctattt tcactttcat
     1081 catcatcatg gtgtcctata tccacattat cattgccatc ctgagaatcc gctcagctga
     1141 ggggaggcgc aaagctttct ccacttgtgc ctcacatttg acagctgtga cattatttta
     1201 tgggtctttg acttttaatt atatccaacc aagctcgcag tactccatgg aacaggaaaa
     1261 gctctctgct atgttttaca ccttggtcat ccctatgctg aaccctctga tttacagcct
     1321 gaggaacaag gatgtgaagg aggcagcaaa aaggttgatt tgtagggaga gcagtacctc
     1381 atga
//
