LOCUS       NM_207561                942 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AL member 6
            (Or5al6), mRNA.
ACCESSION   NM_207561
VERSION     NM_207561.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Zhang,X., Rodriguez,I., Mombaerts,P. and Firestein,S.
  TITLE     Odorant and vomeronasal receptor genes in two mouse genome
            assemblies
  JOURNAL   Genomics 83 (5), 802-811 (2004)
   PUBMED   15081110
REFERENCE   3  (bases 1 to 942)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL845499.9.
            
            On Aug 19, 2006 this sequence version replaced NM_207561.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-942               AL845499.9         37373-38314         c
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.73 cM"
     gene            1..942
                     /gene="Or5al6"
                     /gene_synonym="MOR185-12; Olfr1040"
                     /note="olfactory receptor family 5 subfamily AL member 6"
                     /db_xref="GeneID:404323"
                     /db_xref="MGI:MGI:3030874"
     CDS             1..942
                     /gene="Or5al6"
                     /gene_synonym="MOR185-12; Olfr1040"
                     /note="GA_x6K02T2Q125-47615732-47614791"
                     /codon_start=1
                     /product="olfactory receptor 1040"
                     /protein_id="NP_997444.2"
                     /db_xref="CCDS:CCDS16239.1"
                     /db_xref="GeneID:404323"
                     /db_xref="MGI:MGI:3030874"
                     /translation="MDEDNNSTVHQFILVGLTDDPELEVILFAVFLVIYLTTVLGNLG
                     LIMLIQVSPQLHTPMYFFLCHLAFVDFCYTSSVTPSTIINFLREIKSITFYACATQVC
                     CFITFVVCEMYLLSVMAYDRYVAIWNPLLYVVLMPKKLCLQVIASTYIYGFTVGLVQA
                     VATFHFSFCGSNVINHFYCDDVPLIALACSDTHVKELMLLIIAGFNTLCSLVIVVISY
                     ICILFAILRIRSVEGRRKAFSTCASHLTSITIFYGTVSFMYLQPKSSHSLNTDKFASV
                     SYVVVIPMLNPLIYSLRNQEVKSALKRITDKLSLTIH"
     exon            1..942
                     /gene="Or5al6"
                     /gene_synonym="MOR185-12; Olfr1040"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatgaag ataacaattc aacagtacat cagttcatcc tcgtaggcct gacagatgac
       61 ccagagcttg aggtcatcct ctttgctgtg tttctggtca tctacttaac tactgtcttg
      121 ggtaacctag gactgattat gctaatccaa gtcagccctc agcttcacac acccatgtac
      181 tttttcctct gccacttggc attcgttgat ttctgttata catcctcagt cactccaagc
      241 acaattataa actttcttcg agaaatcaaa agtataacct tctatgcatg tgccactcag
      301 gtttgctgtt ttatcacatt tgttgtttgt gaaatgtact tgctgtcagt aatggcttat
      361 gacagatatg tggccatctg gaaccctctg ctctatgtgg tcctcatgcc taaaaagctc
      421 tgtcttcagg tcattgctag cacatacatt tatggattca ctgtggggct tgttcaggca
      481 gtggcaacct tccacttctc attctgtggc tctaatgtga tcaaccattt ctactgtgat
      541 gatgtcccct taattgctct tgcctgttct gacactcatg tcaaagagct gatgttgcta
      601 atcattgctg gcttcaacac tctttgctct ctggtgattg tggtcatttc ttacatctgc
      661 attctctttg ccatcctgag aattcgttct gttgaaggaa gaaggaaagc cttttccact
      721 tgtgcatccc atctgacttc catcaccata ttttatggaa cagtaagttt tatgtacctg
      781 cagcccaagt caagccattc tctgaacaca gataaatttg cttctgtgtc ttatgtggta
      841 gtaattccca tgttaaaccc actgatctac agcttgagaa atcaggaggt aaaaagtgcc
      901 ttaaagagaa ttactgataa attgtctttg accatccatt aa
//
