LOCUS       NM_001011777            1097 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AL member 1
            (Or5al1), mRNA.
ACCESSION   NM_001011777
VERSION     NM_001011777.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1097)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1097)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL845499.9.
            
            On Feb 25, 2010 this sequence version replaced NM_001011777.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC150927.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1097              AL845499.9         50927-52023         c
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 49.74 cM"
     gene            1..1097
                     /gene="Or5al1"
                     /gene_synonym="MOR185-10; Olfr1042"
                     /note="olfactory receptor family 5 subfamily AL member 1"
                     /db_xref="GeneID:257941"
                     /db_xref="MGI:MGI:3030876"
     exon            1..1097
                     /gene="Or5al1"
                     /gene_synonym="MOR185-10; Olfr1042"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..1015
                     /gene="Or5al1"
                     /gene_synonym="MOR185-10; Olfr1042"
                     /note="olfactory receptor MOR185-10;
                     GA_x6K02T2Q125-47629317-47628376"
                     /codon_start=1
                     /product="olfactory receptor 1042"
                     /protein_id="NP_001011777.1"
                     /db_xref="CCDS:CCDS16240.1"
                     /db_xref="GeneID:257941"
                     /db_xref="MGI:MGI:3030876"
                     /translation="MANSNHSAVSEFILVGLTDDSELQVSLFGVFLVIYLTSVVGNVG
                     LIVLIQVSPQLHTPMYFFLTHLAFIDFCFTSSVTPNTLVNFLREVKSITFYACATQLC
                     CFVTFVVCELYLLSIMAYDRYVAIWNPLLYAVRMPRELCLQVITSTYIYGFTVGLAQA
                     VATFRLSFCGSNVINHFYCDDVPLVALACSDTHVKELMLLIIAGFNTLCSLVIVVISY
                     ICILFAILRIHSAEGRRKAFSTCASHLTSITIFYGTVSFMYLQPKSSHSLNTDKFASV
                     FYVVVIPMLNPLIYSLRNQEVKSALKRIVEKLSSAIK"
ORIGIN      
        1 tccgaatcgg cttctgaatt taggtcgata ttgtatgctc tgaagacttt taggagagta
       61 acatctatct acgatggcta acagcaatca ctctgcagtg tctgagttca tccttgtggg
      121 gctcacagat gactcagagc ttcaggtcag tctcttcggt gtgtttcttg tcatctacct
      181 aactagtgtt gtgggtaatg ttggattgat tgtgttaatt caagtgagtc ctcagcttca
      241 tacccccatg tattttttcc taacccacct ggcttttatt gacttttgtt ttacctcttc
      301 tgtcactcca aacactctgg tgaattttct acgtgaagtc aaaagcataa ccttctacgc
      361 atgtgccact cagttgtgct gctttgtcac atttgtagtt tgtgaactgt acttgctgtc
      421 aatcatggcc tatgacaggt atgtggccat ctggaatccc ctcctctatg cggtccgcat
      481 gcctagggag ctctgtcttc aggtcatcac cagcacatac atttatggat tcactgtggg
      541 gcttgcacag gcagtggcaa ctttccgctt gtctttctgt ggctccaatg tgatcaacca
      601 cttctactgt gatgatgtcc ccttagttgc tctggcctgt tctgacactc atgtcaaaga
      661 gctgatgttg ctaatcattg ctggcttcaa cactctttgc tctctggtga ttgtggttat
      721 ttcttatatc tgcattctct ttgccatcct gaggattcat tctgctgaag gaagaaggaa
      781 agccttttcc acttgtgcat cccacctgac ttccatcacc atattttatg gaacagtaag
      841 ttttatgtac ttgcagccca agtcaagtca ttctctgaac acagataaat ttgcttctgt
      901 gttttatgtg gtagtaattc ccatgttaaa cccactgatc tacagcttga gaaatcagga
      961 agtaaagagt gctctgaaga gaattgtaga aaagttatct tcagccatca agtaactgaa
     1021 gaaccactgg ataaaataat caggtgtctt tttattattt agcatctaca ttcgcagcac
     1081 tggaaaaaga gtcccca
//
