LOCUS       NM_146536               1074 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AC member 20
            (Or5af2), mRNA.
ACCESSION   NM_146536
VERSION     NM_146536.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1074)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1074)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL662903.10.
            
            On Feb 24, 2010 this sequence version replaced NM_146536.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC120742.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1074              AL662903.10        45749-46822
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 36.32 cM"
     gene            1..1074
                     /gene="Or5af2"
                     /gene_synonym="MOR222-2; Olfr313"
                     /note="olfactory receptor family 5 subfamily AC member 20"
                     /db_xref="GeneID:258529"
                     /db_xref="MGI:MGI:3030147"
     exon            1..1074
                     /gene="Or5af2"
                     /gene_synonym="MOR222-2; Olfr313"
                     /inference="alignment:Splign:2.1.0"
     CDS             83..1009
                     /gene="Or5af2"
                     /gene_synonym="MOR222-2; Olfr313"
                     /note="olfactory receptor MOR222-2;
                     GA_x6K02T2NKPP-590035-589109"
                     /codon_start=1
                     /product="olfactory receptor 313"
                     /protein_id="NP_666747.2"
                     /db_xref="CCDS:CCDS24748.1"
                     /db_xref="GeneID:258529"
                     /db_xref="MGI:MGI:3030147"
                     /translation="MSNHTRVTHFILRGFSDIPQLRLMAIPVFLLIYTFGLLGNLSII
                     TAVTRDSRLHSPMYFFLKNLSFLDICYTSATIPKAVVISLTGSGVISYQECVAQLYIF
                     LTFSSSECFLLTAMAYDRCLAILRPLIYGTIMSHKYCSALVVTAWVGGAIYSAFHTFN
                     TFSLPYCGPNVIDHFFCDIPPVMRLSCTDYHLSEEVGFAVSSCIVMSSFALTVVSYIG
                     IVATVLCIPSVEGRWKAFSTCSSHLTTVILFYGTGSFVYLRPASQYSPTLGPLASIFY
                     SVVTPSLNPVVYCLRNKDMKFALQKLYCGRKY"
ORIGIN      
        1 cacatgtcct gagcctgcct attgtttctg tccccttcct cagctgtgtg cggcactgca
       61 tctgagcaca atctgagcag acatgtccaa tcacacaaga gtgactcact tcatcctcag
      121 gggcttctca gatatcccac agctgagatt gatggccata ccagttttct tgctcattta
      181 cacatttggc ctcctgggga acctgtccat catcacggct gtgacaagag acagtcgact
      241 ccactctccc atgtacttct tcctgaagaa tctgtctttc ctggacattt gctacacctc
      301 agccaccatc cccaaggcag tggtgatatc cctcacaggc tcaggggtca tctcctatca
      361 agagtgtgta gcacagctct acatatttct cacattctct tcttctgaat gctttctgct
      421 cacagccatg gcttatgacc ggtgcctggc catcctcaga ccactgatct atggaaccat
      481 catgagccac aaatattgtt ctgcattggt ggtcactgcc tgggtaggtg gggccatcta
      541 ctcagccttt catacattca acaccttctc ccttccctac tgtggaccca atgttattga
      601 tcacttcttc tgtgacatcc ctccagtcat gagactgtcc tgcactgact accatctcag
      661 tgaggaggtg ggctttgctg tcagtagttg cattgtcatg agctcctttg ccctcacagt
      721 ggtctcctat attggcattg tggccacagt tctttgcatc ccctcagtag aaggcaggtg
      781 gaaagccttt tctacctgct cctctcacct gaccacagtc atcttgtttt atggaactgg
      841 gagctttgtg tatctgaggc ccgcctctca gtactccccg accctgggtc ccctggcatc
      901 tattttctac tctgtagtca caccatctct gaatccagtt gtctattgtc tgaggaacaa
      961 agatatgaag tttgctctac agaaacttta ttgtgggaga aagtactgag accttgaaga
     1021 ctacagtgtg tgacactgat ggttgttttt ggagccaact gtttgaccca caca
//
