LOCUS       NM_001011819             927 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 5 subfamily AF member 1
            (Or5af1), mRNA.
ACCESSION   NM_001011819
VERSION     NM_001011819.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 927)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 927)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL662903.10.
            
            On Feb 24, 2010 this sequence version replaced NM_001011819.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC104273.1, SRR5189673.21241.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-927               AL662903.10        59977-60903
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 36.32 cM"
     gene            1..927
                     /gene="Or5af1"
                     /gene_synonym="GA_x5J8B7W3UM0-1747565-1747342; MOR222-4P;
                     Olfr312"
                     /note="olfactory receptor family 5 subfamily AF member 1"
                     /db_xref="GeneID:258065"
                     /db_xref="MGI:MGI:3030146"
     CDS             1..927
                     /gene="Or5af1"
                     /gene_synonym="GA_x5J8B7W3UM0-1747565-1747342; MOR222-4P;
                     Olfr312"
                     /note="olfactory receptor MOR222-4P; olfactory receptor
                     GA_x5J8B7W3UM0-1747565-1747342;
                     GA_x6K02T2NKPP-575829-574903"
                     /codon_start=1
                     /product="olfactory receptor 312"
                     /protein_id="NP_001011819.1"
                     /db_xref="CCDS:CCDS24749.1"
                     /db_xref="GeneID:258065"
                     /db_xref="MGI:MGI:3030146"
                     /translation="MSNHTRVTHFILRGFSDVPQLRLVLIPFFLFFYTFGILGNFSII
                     TAVTRDSRLHSPMYFFLKNLSFLDICYTSATIPKAVVISLTGSGVISYQECAAQLYII
                     FTFACTECFLLTAMAYDRCLAILRPLIYGTIMSQKYCSALVVTAWVGGAIYSAFHTFN
                     TFSLPYCGPNVIDHFFCDMPPVMRLSCTDYHLTEEVGFAVSSCIVMSSFVLTVVSYIG
                     IVATVLRIPSVEGRWKAFSTCSSHLTTVILFYGTGSFVYLRPASQYSPTLGRLASIFY
                     SVVTPSLNPVVYCLRNKDMKFALQKLYCGRKY"
     exon            1..927
                     /gene="Or5af1"
                     /gene_synonym="GA_x5J8B7W3UM0-1747565-1747342; MOR222-4P;
                     Olfr312"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtccaatc acacaagagt gactcacttc atcctcaggg gcttctcaga tgtcccacag
       61 ctgagattgg tgctcatccc atttttcttg ttcttttaca ctttcggcat cctggggaac
      121 ttctccatca tcacggctgt gacaagagac agtcgactcc actctcccat gtacttcttc
      181 ctgaagaatc tgtctttcct ggacatttgc tacacctcag ccaccatccc caaggcagtg
      241 gtgatatccc tcacaggctc aggggtcatc tcctatcaag agtgtgcagc acagctctac
      301 ataattttta catttgcatg tacagaatgc tttctactca cggccatggc ttatgaccgg
      361 tgcctagcca tcctcagacc actgatctat ggaaccatca tgagccagaa atattgttct
      421 gcattggtgg tcactgcctg ggtgggtgga gctatctact cagccttcca cacattcaac
      481 accttctccc tcccctactg tggacccaat gttattgatc acttcttctg tgacatgcca
      541 ccagtcatga gactgtcctg cactgactac catctcactg aggaggtggg ctttgctgtc
      601 agtagttgca ttgtcatgag ctcattcgtc ctcacagtgg tctcctatat tggcattgtg
      661 gccacagttc ttcgcatccc ctcagtagaa ggcaggtgga aagccttttc tacctgctcc
      721 tctcacctga ccacagtcat cttgttttat ggaactggaa gctttgtgta tctgaggccc
      781 gcctctcagt actccccgac cctgggtcgc ctggcatcta ttttctactc tgtagtcaca
      841 ccatctctga atccagttgt ctattgtctg aggaacaaag atatgaagtt tgctctacag
      901 aaactttatt gtgggagaaa gtattga
//
