LOCUS       NM_146379               1156 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 52 subfamily U member 1
            (Or52u1), mRNA.
ACCESSION   NM_146379
VERSION     NM_146379.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   de March,C.A., Titlow,W.B., Sengoku,T., Breheny,P., Matsunami,H.
            and McClintock,T.S.
  TITLE     Modulation of the combinatorial code of odorant receptor response
            patterns in odorant mixtures
  JOURNAL   Mol Cell Neurosci 104, 103469 (2020)
   PUBMED   32061665
  REMARK    GeneRIF: This odorant receptor, Olfr654, responds to the odorant
            isoamyl acetate in vivo.
REFERENCE   3  (bases 1 to 1156)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 1156)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 1156)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC125558.1.
            
            On Jan 26, 2019 this sequence version replaced NM_146379.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC125558.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1156              BC125558.1         1-1156
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 55.69 cM"
     gene            1..1156
                     /gene="Or52u1"
                     /gene_synonym="MOR38-2; Olfr654"
                     /note="olfactory receptor family 52 subfamily U member 1"
                     /db_xref="GeneID:258377"
                     /db_xref="MGI:MGI:3030488"
     exon            1..1156
                     /gene="Or52u1"
                     /gene_synonym="MOR38-2; Olfr654"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..1062
                     /gene="Or52u1"
                     /gene_synonym="MOR38-2; Olfr654"
                     /note="olfactory receptor MOR38-2;
                     GA_x6K02T2PBJ9-7215221-7216195"
                     /codon_start=1
                     /product="olfactory receptor 654"
                     /protein_id="NP_666491.1"
                     /db_xref="CCDS:CCDS21620.1"
                     /db_xref="GeneID:258377"
                     /db_xref="MGI:MGI:3030488"
                     /translation="MQVVSLLLPSGTLPGSTMMPCNSTSHPSFFILQGIPGMEDKHKW
                     ISIPFSSMYFITVMGNCTILLTISMERSLHKPMFLLLFFLALTDLGMSTTTIPKVLCI
                     FWFGQSQISYEGCLVQLFFIHSISAMQSSVLMTMAFDRYVAICKPLRYSTILSNSRIG
                     LIGLASLVRAILFILPMPILLQRMPFHANRVIPTTYCEHMAVVKMVCVDTTFNRIYGL
                     VVAMLVVGVDISAIASSYALILRAIMHLSSKEAHHKAVNTCTTHICVMLVSYTPSLFS
                     FLTHRFGRGIPPHVHTILGNLYFLVPPMLNPIIYGVKTKEFRDKITKYLYRRKEPIIF
                     SHNQKLV"
ORIGIN      
        1 cccccatctt aagcatctga aatttttata atttaaatgc aggttgtttc tttgttgctc
       61 ccttcaggta ctttaccagg gtccaccatg atgccttgca acagcaccag ccacccttct
      121 ttcttcattc tccaaggcat tcctgggatg gaagacaaac acaaatggat ctccatcccc
      181 ttctcctcca tgtacttcat caccgtgatg gggaactgca ccattcttct caccatctcc
      241 atggaacgtt ccctgcacaa gcccatgttc ctgcttctct tcttcctggc cctcacagac
      301 ttgggtatgt ctacgaccac cattcctaag gtgctctgca tattctggtt tggacagagt
      361 cagataagct atgaaggctg cttggtccag ctgttcttca tccattccat ctctgccatg
      421 cagtcatctg tcctgatgac catggccttt gaccgttatg tggctatctg taagcccttg
      481 cgttattcca ccattctttc caatagtcgc attggactca ttggcctagc aagcctggtt
      541 agagcaatcc tctttattct ccccatgcct atcctcctcc agcgtatgcc ctttcatgcc
      601 aatcgagtca tccccaccac ctactgtgaa cacatggctg tggtgaagat ggtatgtgtc
      661 gataccacat tcaataggat atatggtttg gttgtggcta tgctggtggt tggggtagac
      721 atctcagcta ttgcctcatc ttatgcatta atcctacgag ctatcatgca tctctcttcc
      781 aaggaagccc accacaaagc agtcaacacc tgcaccacac acatctgtgt catgcttgtc
      841 tcctacaccc ccagtctttt ctcttttctg actcatcgct ttgggagagg cattccacct
      901 catgtccaca ctattcttgg caacctttac ttccttgtac caccaatgct taatcctatt
      961 atttatggag taaaaaccaa ggaatttcgg gacaaaatta ctaaatattt atacaggaga
     1021 aaggagccta taattttttc tcacaatcag aaacttgttt gataatcgag tggttgtatt
     1081 agaaatcaat ggtaagtgtc taggggaaat tgtttaatgg tagaaataca ttgaaatgtc
     1141 agattagcag ccatga
//
