LOCUS       NM_013621               1357 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 52 subfamily A member 5B
            (Or52a5b), mRNA.
ACCESSION   NM_013621 NM_001100160
VERSION     NM_013621.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  AUTHORS   Hirota,J., Omura,M. and Mombaerts,P.
  TITLE     Differential impact of Lhx2 deficiency on expression of class I and
            class II odorant receptor genes in mouse
  JOURNAL   Mol Cell Neurosci 34 (4), 679-688 (2007)
   PUBMED   17350283
REFERENCE   3  (bases 1 to 1357)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 1357)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 1357)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
REFERENCE   6  (bases 1 to 1357)
  AUTHORS   Bulger,M., Bender,M.A., van Doorninck,J.H., Wertman,B.,
            Farrell,C.M., Felsenfeld,G., Groudine,M. and Hardison,R.
  TITLE     Comparative structural and functional analysis of the olfactory
            receptor genes flanking the human and mouse beta-globin gene
            clusters
  JOURNAL   Proc Natl Acad Sci U S A 97 (26), 14560-14565 (2000)
   PUBMED   11121057
REFERENCE   7  (bases 1 to 1357)
  AUTHORS   Feingold,E.A., Penny,L.A., Nienhuis,A.W. and Forget,B.G.
  TITLE     An olfactory receptor gene is located in the extended human
            beta-globin gene cluster and is expressed in erythroid cells
  JOURNAL   Genomics 61 (1), 15-23 (1999)
   PUBMED   10512676
REFERENCE   8  (bases 1 to 1357)
  AUTHORS   Bulger,M., van Doorninck,J.H., Saitoh,N., Telling,A., Farrell,C.,
            Bender,M.A., Felsenfeld,G., Axel,R. and Groudine,M.
  TITLE     Conservation of sequence and structure flanking the mouse and human
            beta-globin loci: the beta-globin genes are embedded within an
            array of odorant receptor genes
  JOURNAL   Proc Natl Acad Sci U S A 96 (9), 5129-5134 (1999)
   PUBMED   10220430
  REMARK    Erratum:[Proc Natl Acad Sci U S A 1999 Jul 6;96(14):8307. von
            Doorninck JH [corrected to van Doorninck JH]]
REFERENCE   9  (bases 1 to 1357)
  AUTHORS   Sullivan,S.L., Adamson,M.C., Ressler,K.J., Kozak,C.A. and Buck,L.B.
  TITLE     The chromosomal distribution of mouse odorant receptor genes
  JOURNAL   Proc Natl Acad Sci U S A 93 (2), 884-888 (1996)
   PUBMED   8570653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC127296.4.
            
            On or before Sep 7, 2007 this sequence version replaced
            NM_001100160.1, NM_013621.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-53                AC127296.4         6662-6714
            54-175              AC127296.4         9538-9659
            176-1357            AC127296.4         9798-10979
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.85 cM"
     gene            1..1357
                     /gene="Or52a5b"
                     /gene_synonym="3'beta3; 3'[b]3; MOR22-2; Olfr69"
                     /note="olfactory receptor family 52 subfamily A member 5B"
                     /db_xref="GeneID:18370"
                     /db_xref="MGI:MGI:1341789"
     exon            1..53
                     /gene="Or52a5b"
                     /gene_synonym="3'beta3; 3'[b]3; MOR22-2; Olfr69"
                     /inference="alignment:Splign:2.1.0"
     exon            54..175
                     /gene="Or52a5b"
                     /gene_synonym="3'beta3; 3'[b]3; MOR22-2; Olfr69"
                     /inference="alignment:Splign:2.1.0"
     exon            176..1357
                     /gene="Or52a5b"
                     /gene_synonym="3'beta3; 3'[b]3; MOR22-2; Olfr69"
                     /inference="alignment:Splign:2.1.0"
     CDS             239..1189
                     /gene="Or52a5b"
                     /gene_synonym="3'beta3; 3'[b]3; MOR22-2; Olfr69"
                     /note="olfactory receptor MOR22-2;
                     GA_x6K02T2PBJ9-6494485-6493535"
                     /codon_start=1
                     /product="olfactory receptor 69"
                     /protein_id="NP_038649.2"
                     /db_xref="CCDS:CCDS21590.1"
                     /db_xref="GeneID:18370"
                     /db_xref="MGI:MGI:1341789"
                     /translation="MIKFNGSVFMPSVLTLVGIPGLESVQCWIGIPFCVMYIIAMIGN
                     SLILVIIKSEKSLHIPMYIFLAILAVTDIALSTCILPKMLGIFWFHMPQISFDACLLQ
                     MELIHSFQATESGILLAMALDRYVAICNPLRHATIFSPQLTTCLGAGALLRSLITTFP
                     LILLIKCRLKYFRTTIISHSYCEHMAIVKLAAQDIRINKICGLLVAFAILGFDIVFIT
                     FSYVRIFITVFQLPQKEARFKAFNTCIAHICVFLQFYLLAFFSFFTHRFGAHIPPYVH
                     ILLSDLYLLVPPFLNPIVYGVKTKQIRDQVLKMLFSKKPL"
ORIGIN      
        1 accacaaaga tcctattcat gagctctgtg tacatctcac taaatggctc cagttgcaaa
       61 accacaagag ctcatagagg acaaatatca agcgaaagga atttttgatc aaaggcattt
      121 ggtcttagag aagaagcaag ttatctactg aatttaactt acagaaatga ttcagtctta
      181 gtatagaaca gaagttgaag cagcaatacc gctacagctt tctactgaca ggttcagcat
      241 gatcaagttc aatggctcag tcttcatgcc ttctgtttta acactagtgg ggatccctgg
      301 cctggaatca gtgcagtgct ggattggaat tccattctgt gtcatgtaca tcattgctat
      361 gattgggaac tccctaattt tagttataat caaaagtgaa aagagcctcc acatacccat
      421 gtatattttc ttggctattt tggcagtcac agacattgcc cttagcacat gcattcttcc
      481 caaaatgttg ggcatcttct ggtttcacat gccacagatt tcctttgatg cctgcctgct
      541 gcagatggaa ctcatccact cattccaggc cacagaatca ggcatcctcc tggccatggc
      601 tctggatcgc tatgtggcta tctgcaaccc cctcagacat gctactatct tctctccaca
      661 actcaccact tgccttggag ctggtgcatt actgaggtct ctcattacca catttccatt
      721 gatattgctc atcaaatgtc gccttaagta ctttcgaact accattatct cccactcgta
      781 ctgtgaacac atggccattg tgaaattggc agctcaagat atcagaatca acaagatatg
      841 tggcctcctt gttgcctttg ccatcttagg gtttgacata gtcttcatta ccttctccta
      901 tgtgcgaatc ttcatcacgg tcttccagct gccccagaag gaggctcgat tcaaagcctt
      961 caatacctgc attgctcaca tctgtgtctt cctgcagttc taccttctgg ccttcttctc
     1021 tttcttcaca cacaggtttg gggctcacat acccccctat gtgcacatcc tcctgtcaga
     1081 cctttacctg ttagtcccac cttttctgaa ccccattgtt tatggtgtta aaactaaaca
     1141 aatccgtgac caagtcctga aaatgctttt ctccaagaaa cccctgtgaa catcagtgac
     1201 tccctctgtt gaaaagttgt gtggtttcta attagaactt gaatgagtta aaccctaaat
     1261 cttatacaga taagaaagtg tgtggcaaca tgtgaatttc acatactcaa aatttaagga
     1321 agtatgggtt taataaacaa aaacaacctt gtgtatt
//
