LOCUS       NM_147073                957 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 51 subfamily A member 39
            (Or51a39), mRNA.
ACCESSION   NM_147073
VERSION     NM_147073.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 957)
  AUTHORS   Hirota,J., Omura,M. and Mombaerts,P.
  TITLE     Differential impact of Lhx2 deficiency on expression of class I and
            class II odorant receptor genes in mouse
  JOURNAL   Mol Cell Neurosci 34 (4), 679-688 (2007)
   PUBMED   17350283
REFERENCE   3  (bases 1 to 957)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 957)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 957)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
REFERENCE   6  (bases 1 to 957)
  AUTHORS   Branscomb,A., Seger,J. and White,R.L.
  TITLE     Evolution of odorant receptors expressed in mammalian testes
  JOURNAL   Genetics 156 (2), 785-797 (2000)
   PUBMED   11014824
REFERENCE   7  (bases 1 to 957)
  AUTHORS   Vanderhaeghen,P., Schurmans,S., Vassart,G. and Parmentier,M.
  TITLE     Specific repertoire of olfactory receptor genes in the male germ
            cells of several mammalian species
  JOURNAL   Genomics 39 (3), 239-246 (1997)
   PUBMED   9119360
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC161431.4.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC104110.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-957               AC161431.4         128789-129745       c
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.82 cM"
     gene            1..957
                     /gene="Or51a39"
                     /gene_synonym="MOR11-2; MTPCR33; Olfr33; ORL181"
                     /note="olfactory receptor family 51 subfamily A member 39"
                     /db_xref="GeneID:18332"
                     /db_xref="MGI:MGI:109302"
     CDS             1..957
                     /gene="Or51a39"
                     /gene_synonym="MOR11-2; MTPCR33; Olfr33; ORL181"
                     /note="odorant receptor; GA_x6K02T2PBJ9-5431102-5430146"
                     /codon_start=1
                     /product="olfactory receptor 33"
                     /protein_id="NP_667284.1"
                     /db_xref="CCDS:CCDS21544.1"
                     /db_xref="GeneID:18332"
                     /db_xref="MGI:MGI:109302"
                     /translation="MISSKAFVNITFFQPQSFLMTGIPGLEFAHGWISIPFSSMYTVA
                     LTGNCLILLAVRRTHSLHQPMYYFLSMLALSDVGLSLSTLPSTLAVLWFDYRFIDFNA
                     CLIQMFFLHFFSVVESSVLLAMSFDRFVAISNPLRYASVLTNNVIIRIGVAITTRATL
                     SLLPLPFLLKRLNYCPGKILLSHSFCFHADVMKLACADITVNILYGLYVVLSTVGIDS
                     LLIVMSYSLILHTVMGLASPRERVRTLNTCVSHILAVLVFYIPVIGVSMIHRFGKHLP
                     HIVHALVAYVYLVVPPVLNPIIYSVKSKPIRGAMFRVLSRKG"
     exon            1..957
                     /gene="Or51a39"
                     /gene_synonym="MOR11-2; MTPCR33; Olfr33; ORL181"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatctcct caaaggcttt tgtcaatatc accttcttcc agccacaatc tttcctgatg
       61 actggcatac caggactaga gtttgctcat ggctggatct ccatcccatt ctcttccatg
      121 tacactgtgg cactcactgg aaactgcctc atcctcctgg ctgtgaggag gacccatagc
      181 ctacaccagc ccatgtacta ctttctgtcc atgctagccc taagtgatgt gggtctcagc
      241 ttgtccacat tgccttccac cctggctgtg ctctggtttg actatcgttt catcgacttc
      301 aatgcctgtc tgatccaaat gttctttctt catttcttct ctgtggtaga gtcctcagtc
      361 ctcttggcca tgtcatttga ccgctttgtg gctatctcca accctctgcg ctatgcatct
      421 gtcctcacta acaatgtcat catcaggatt ggggtggcca ttacaacccg agctactttg
      481 tccctcttac cattgccctt cttgctgaag aggctgaact actgccctgg caagatcctc
      541 ctgtctcact cattctgttt ccatgctgat gtcatgaagc tggcctgtgc tgacattact
      601 gtcaacatcc tatatggact ctatgtggtt ctgtccacag tgggtataga ctccttgctt
      661 attgtcatgt cctattcctt gattcttcac acagtcatgg ggctagcctc tcccagggag
      721 cgtgtccgga ccctcaacac atgtgtttcc catatcttgg ctgtcctggt cttctacatt
      781 ccagtcatag gtgtgtccat gatccatcgt tttggaaagc acctgcctca cattgttcat
      841 gccctggttg cgtatgtgta ccttgtggtg cctcctgtgc tcaaccccat catctacagt
      901 gtcaagtcca aacccatcag gggagccatg ttcagagtgc taagtaggaa aggctaa
//
