LOCUS       NM_146902                936 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 4 subfamily C member 116
            (Or4c116), mRNA.
ACCESSION   NM_146902
VERSION     NM_146902.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 936)
  AUTHORS   de March,C.A., Titlow,W.B., Sengoku,T., Breheny,P., Matsunami,H.
            and McClintock,T.S.
  TITLE     Modulation of the combinatorial code of odorant receptor response
            patterns in odorant mixtures
  JOURNAL   Mol Cell Neurosci 104, 103469 (2020)
   PUBMED   32061665
  REMARK    GeneRIF: This odorant receptor, Olfr1221, responds to the odorant
            whiskey lactone in vivo
REFERENCE   3  (bases 1 to 936)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 936)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 936)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928818.8.
            
            On Feb 26, 2010 this sequence version replaced NM_146902.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               AL928818.8         55902-56837         c
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 50.03 cM"
     gene            1..936
                     /gene="Or4c116"
                     /gene_synonym="MOR233-3; Olfr1221"
                     /note="olfactory receptor family 4 subfamily C member 116"
                     /db_xref="GeneID:258904"
                     /db_xref="MGI:MGI:3031055"
     CDS             1..936
                     /gene="Or4c116"
                     /gene_synonym="MOR233-3; Olfr1221"
                     /note="olfactory receptor MOR233-3;
                     GA_x6K02T2Q125-50591144-50590209"
                     /codon_start=1
                     /product="olfactory receptor 1221"
                     /protein_id="NP_667113.2"
                     /db_xref="CCDS:CCDS16366.1"
                     /db_xref="GeneID:258904"
                     /db_xref="MGI:MGI:3031055"
                     /translation="MQNQSLVNEFILLGLSQNTKVEKILFLLFLLIYLATIGGNMIIV
                     ATIIYSPALLGSPMYFFLVFLSLLDACTSTVVTPKMIVGFFYERKIISFEGCMTQLFA
                     IHFFTAVEVIVLSAMAYDRYVAICKPLHYLSIMSKRVCGVLVGIAWAGGFLHSIIQIV
                     FTLQLPFCGPNVIDHYMCDLFPLLKLACTDTQIFVILVFANSSSICIIIFSLLLVSYG
                     VILFSLRAHSSEGRYKALSTCGSHITVVVLFFVPCILIYARPSSPFSFEKNTLIFANV
                     LTPLLNPMVYTFRNKEMKSAIRKMWKRLVVVSDKY"
     exon            1..936
                     /gene="Or4c116"
                     /gene_synonym="MOR233-3; Olfr1221"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcaaaatc aaagccttgt caatgagttc atactcctgg gtctttctca gaacacaaaa
       61 gttgagaaaa tattgtttct tctatttttg ttaatctacc ttgcaactat tggtggcaac
      121 atgataattg tggcaactat catctacagc cctgcactgc tgggctcccc tatgtacttc
      181 ttcttggtat tcctgtcctt actggatgca tgcacttcta ctgttgtaac acctaagatg
      241 atcgtaggct tcttctatga aaggaagatc atttcttttg aaggctgcat gacccaattg
      301 tttgccatac acttctttac tgcggtagag gtgattgtac tgtcagctat ggcctatgac
      361 cgttatgtgg ctatttgcaa acccttgcac tacctgtcca ttatgagcaa gagggtctgt
      421 ggtgtgttgg taggcatagc atgggctggg ggattcttgc attctatcat acaaattgtg
      481 tttactttgc aattaccatt ctgtggaccc aatgttattg accattatat gtgtgacttg
      541 ttcccattac tgaagcttgc ctgcactgac acacaaattt ttgttatttt ggtgtttgcc
      601 aatagtagtt ctatctgcat cattatcttc tccttgcttc ttgtctccta tggtgtcatc
      661 ttgttctctt tgagagccca cagttctgaa gggcgatata aagctctctc cacctgtggg
      721 tcccatatta cagtcgttgt tttattcttt gttccatgca tattaatata tgcacgacct
      781 tcatctccat tctcctttga aaaaaacaca cttatatttg ccaatgtcct gacaccattg
      841 ctcaatccta tggtttatac attcaggaat aaggaaatga agagtgccat aaggaaaatg
      901 tggaagagat tggtagtggt ttctgataaa tattaa
//
