LOCUS       NM_001011741            1128 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 2 subfamily Y member 1C
            (Or2y1c), mRNA.
ACCESSION   NM_001011741
VERSION     NM_001011741.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Peng,Y.C., Wu,J., He,X., Dai,J., Xia,L., Valenzuela-Leon,P.,
            Tumas,K.C., Singh,B.K., Xu,F., Ganesan,S., Munir,S., Calvo,E.,
            Huang,R., Liu,C., Long,C.A. and Su,X.Z.
  TITLE     NAD activates olfactory receptor 1386 to regulate type I interferon
            responses in Plasmodium yoelii YM infection
  JOURNAL   Proc Natl Acad Sci U S A 121 (23), e2403796121 (2024)
   PUBMED   38809710
  REMARK    GeneRIF: NAD activates olfactory receptor 1386 to regulate type I
            interferon responses in Plasmodium yoelii YM infection.
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1128)
  AUTHORS   Kang,N., Kim,H., Jae,Y., Lee,N., Ku,C.R., Margolis,F., Lee,E.J.,
            Bahk,Y.Y., Kim,M.S. and Koo,J.
  TITLE     Olfactory marker protein expression is an indicator of olfactory
            receptor-associated events in non-olfactory tissues
  JOURNAL   PLoS One 10 (1), e0116097 (2015)
   PUBMED   25635859
  REMARK    GeneRIF: Three olfactory receptors (olfr544, olfr558, and olfr1386)
            were expressed in the olfactory marker protein (+) cells of the
            bladder and thyroid.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1128)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   5  (bases 1 to 1128)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   6  (bases 1 to 1128)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL646088.23.
            
            On Feb 25, 2010 this sequence version replaced NM_001011741.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC147372.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1128              AL646088.23        19559-20686
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 29.53 cM"
     gene            1..1128
                     /gene="Or2y1c"
                     /gene_synonym="MOR256-50; Olfr1386"
                     /note="olfactory receptor family 2 subfamily Y member 1C"
                     /db_xref="GeneID:257888"
                     /db_xref="MGI:MGI:3031220"
     exon            1..1128
                     /gene="Or2y1c"
                     /gene_synonym="MOR256-50; Olfr1386"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..1029
                     /gene="Or2y1c"
                     /gene_synonym="MOR256-50; Olfr1386"
                     /note="olfactory receptor MOR256-50;
                     GA_x6K02T2QP88-5964781-5963852"
                     /codon_start=1
                     /product="olfactory receptor 1386"
                     /protein_id="NP_001011741.1"
                     /db_xref="CCDS:CCDS24611.1"
                     /db_xref="GeneID:257888"
                     /db_xref="MGI:MGI:3031220"
                     /translation="MDSFNATLEERFFLVGFSDWPQLELILFVFISIVYSLTIFGNTT
                     IIALSRIDLRLHTPMYFFLSNLSFLDLCFTTSTVPQLLINLYGQDRTISYGGCVAQLF
                     IYLALGSTECVLLVVMAFDRYAAVCRPLHYTTIMHPLLCQALALASWVGGFLNSLIQT
                     GLMMTMPLCGHRLNHFFCEMPVFLKLACQDTGGTEAKMFVARAIILVFPATLILGSYG
                     HIAKAVLKVKSTAGRRKAFGTCGSHLLVVSLFYGSAIYTYLQPKSSYSESKGKFVALF
                     YTIVTPMLNPLIYTLRNKDVKGALWKVLGRGTD"
ORIGIN      
        1 tggaaatcaa agggcctggt tcaggaaatg ctgtttagat tcgtgatctt tatagtggga
       61 actaagttat ccccctgttg tttgtgcaca taaaagatta tggatagttt caatgccacg
      121 ttagaagaga gattcttttt ggtgggcttt tcagattggc ctcagctgga actcatcctt
      181 tttgttttta tttcaattgt ctactcccta actatctttg gcaacactac catcattgct
      241 ctctcccgaa tagaccttcg actgcacacc cccatgtact tcttcctctc aaatctctcc
      301 tttctggacc tctgcttcac caccagcacc gtgccccagc tcctcatcaa cctctatgga
      361 caagacagga ccatcagcta tggagggtgt gtggcccagc tgttcatata tcttgctctg
      421 ggatccactg agtgtgtgct cctggtagtg atggcttttg accgctatgc tgctgtgtgt
      481 cgtccactgc actacacaac catcatgcac ccccttctct gtcaggcatt ggctcttgct
      541 tcatgggtag gaggattctt gaactctctg attcaaacag gcctcatgat gaccatgcca
      601 ctctgtggac atcgactgaa tcacttcttc tgtgagatgc ctgtcttcct caagttggcc
      661 tgccaggaca caggaggaac agaggccaag atgtttgtgg ccagagccat aatcttggtc
      721 ttccctgcaa cattaattct tggctcctat ggacacattg ctaaagcagt actaaaggtc
      781 aagtcaacag ctggacgcag aaaagctttt gggacatgtg ggtcccacct cctggtggtt
      841 tccctgtttt atggctcagc catttacaca tacttgcaac ccaagagcag ttattctgaa
      901 agcaagggga agtttgtggc ccttttttat actattgtca cccccatgct caaccctctg
      961 atctataccc tgaggaacaa ggatgtgaag ggggctctgt ggaaggtgct agggagaggc
     1021 acagactaag agtactaggg aagaaaaaaa caggaccact acaagtttct gtaatagcat
     1081 ttatgtccta aagtctaccc tgttctaccg accaagaaat agcctgca
//
