LOCUS       NM_001013575            1672 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 14 subfamily J member 9
            (Or14j9), mRNA.
ACCESSION   NM_001013575 NM_172423 XM_011246464
VERSION     NM_001013575.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Amadou,C., Younger,R.M., Sims,S., Matthews,L.H., Rogers,J.,
            Kumanovics,A., Ziegler,A., Beck,S. and Lindahl,K.F.
  TITLE     Co-duplication of olfactory receptor and MHC class I genes in the
            mouse major histocompatibility complex
  JOURNAL   Hum Mol Genet 12 (22), 3025-3040 (2003)
   PUBMED   14506126
REFERENCE   3  (bases 1 to 1672)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   4  (bases 1 to 1672)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   5  (bases 1 to 1672)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CR974439.10.
            
            On or before Feb 9, 2018 this sequence version replaced
            XM_011246464.2, NM_001013575.4.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK016338.1, BY715980.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-74                CR974439.10        135274-135347
            75-171              CR974439.10        138020-138116
            172-307             CR974439.10        139037-139172
            308-575             CR974439.10        139369-139636
            576-1672            CR974439.10        140390-141486
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 19.16 cM"
     gene            1..1672
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /note="olfactory receptor family 14 subfamily J member 9"
                     /db_xref="GeneID:258096"
                     /db_xref="MGI:MGI:2177495"
     exon            1..74
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /inference="alignment:Splign:2.1.0"
     exon            75..171
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /inference="alignment:Splign:2.1.0"
     exon            172..307
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /inference="alignment:Splign:2.1.0"
     exon            308..575
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /inference="alignment:Splign:2.1.0"
     exon            576..1672
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /inference="alignment:Splign:2.1.0"
     CDS             602..1564
                     /gene="Or14j9"
                     /gene_synonym="4930580F03Rik; MOR218-4; Olfr112"
                     /note="GA_x6K02T2PSCP-2023769-2022807"
                     /codon_start=1
                     /product="olfactory receptor 112"
                     /protein_id="NP_001013593.2"
                     /db_xref="CCDS:CCDS28756.1"
                     /db_xref="GeneID:258096"
                     /db_xref="MGI:MGI:2177495"
                     /translation="MIVENITTMRGFLLMGFSDNHELQIVQAVLFLVTYLVGSAGNVI
                     IITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDSSLAQSGYISYAQCMLQIF
                     FFTAFAWGELAILTVMSYDRYVAICLPLHYEVIMSPRKCTWAVATVWLSGGISGTLYI
                     TGTLFIRFCGDKIIHQFFCDVPQLLKLSCSNDHLVIMDMVSFLTAVSFACFTGIVISY
                     VHIFSTVLRMPSAESRSKVFSTCLPHLFVVSLFLSTGAFAYLNLTSDSSTALEFLLSI
                     FYTVLPPTLNPVIYSLRNETIKNVVRKLLLSTKFTVRIIFSCCF"
ORIGIN      
        1 gtattccact ttcctagctg gggtgcctta tctggcctca atgggaaagg atgcacttag
       61 ttctgaggca aatgggacat aataccattt aaaagtctgc aaccggagac aagaaatatg
      121 agaaattatt gatcagcttg gagagccaca tgtacaacac atcatcctgg aatggaggat
      181 ctttctgtga agctcacact ggttttaatt cagcatactg ctgccacagg tcctggggct
      241 cattttctaa tgtcatggct gaatctaaga tctctttaac tacaatcaaa atccaacatc
      301 ctgtcagaac tcaccaatgg gacaaaaaag aagaaaaaca ttcaggaaga tgacactcca
      361 ttttatgctc atcaccccca aacaccaaat gcaactttca tgggattatt ttcaatcctt
      421 cagctatcaa aaggaacatg atctaaagta tcacttctac tggaatcata aatgacttga
      481 aaaattcagt catttattgg atgttggtca ttttcctcca catcttaaac tatctcaaga
      541 aatcaccatc tatcttcaga attgtctctg ttttgctgct actgcaattt atgttttcaa
      601 aatgatagtg gaaaatataa ccacaatgag aggattcctc ctcatgggat tctctgacaa
      661 ccatgagctg cagatcgtac aggctgtgct cttcttggtg acatacctag tcggctcagc
      721 agggaacgtc atcattatca ccatcacaac actagaccca cagctccagt ctccaatgta
      781 ttactttctg aagcaccttt ccattctgga cctctcatcc ctctctgtca cagttcccca
      841 gtatgttgac agttccctgg cacaaagtgg ctacatttca tatgcacagt gcatgctgca
      901 gatttttttc ttcacagctt ttgcctgggg tgagctggcc attctcacag tgatgtctta
      961 tgaccgctat gtggccatct gcctcccatt gcactatgag gtcatcatga gtcccagaaa
     1021 gtgcacttgg gctgtggcaa ctgtgtggct aagtggaggt atctcaggaa cattgtacat
     1081 aacaggtaca ctctttatca gattctgtgg ggacaaaatt attcaccagt tcttctgtga
     1141 tgtcccccag ttgctcaagc tctcctgctc taatgaccac cttgtaataa tggacatggt
     1201 tagtttcctg actgcagttt cctttgcctg tttcactggg attgtcatct cctatgtcca
     1261 catattctcc acagttctca ggatgccctc tgctgaaagc aggtctaagg tcttctctac
     1321 ttgcctgccc catctttttg ttgtctcatt gtttctttct acaggcgcct ttgcatatct
     1381 aaacctaacc tcagactctt caactgcttt agagttcttg ctctctatct tttacacagt
     1441 actacctcca actctcaacc ctgttattta tagtctgaga aatgagacga taaagaatgt
     1501 tgtaaggaag ttactgttga gcacaaaatt cactgttaga atcatttttt cctgttgttt
     1561 ctgacttttc aattatacac aagaatgttt atagtcattg ggattccttc aaactgtaat
     1621 gttaatgaag agtattgttt tgttttgttt tcttatagat aaactccatt gt
//
