LOCUS       NM_146934               1190 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 13 subfamily A member 18
            (Or13a18), mRNA.
ACCESSION   NM_146934
VERSION     NM_146934.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 1190)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 1190)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
REFERENCE   5  (bases 1 to 1190)
  AUTHORS   Krautwurst,D., Yau,K.W. and Reed,R.R.
  TITLE     Identification of ligands for olfactory receptors by functional
            expression of a receptor library
  JOURNAL   Cell 95 (7), 917-926 (1998)
   PUBMED   9875846
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC162285.6.
            
            On Jul 20, 2011 this sequence version replaced NM_146934.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB174202.1, CB173051.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                AC162285.6         109241-109338       c
            99-153              AC162285.6         105041-105095       c
            154-1190            AC162285.6         99554-100590        c
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 85.75 cM"
     gene            1..1190
                     /gene="Or13a18"
                     /gene_synonym="IB7; ID12; IF5; MOR253-8; Olfr46"
                     /note="olfactory receptor family 13 subfamily A member 18"
                     /db_xref="GeneID:18345"
                     /db_xref="MGI:MGI:1333824"
     exon            1..98
                     /gene="Or13a18"
                     /gene_synonym="IB7; ID12; IF5; MOR253-8; Olfr46"
                     /inference="alignment:Splign:2.1.0"
     exon            99..153
                     /gene="Or13a18"
                     /gene_synonym="IB7; ID12; IF5; MOR253-8; Olfr46"
                     /inference="alignment:Splign:2.1.0"
     exon            154..1190
                     /gene="Or13a18"
                     /gene_synonym="IB7; ID12; IF5; MOR253-8; Olfr46"
                     /inference="alignment:Splign:2.1.0"
     CDS             234..1190
                     /gene="Or13a18"
                     /gene_synonym="IB7; ID12; IF5; MOR253-8; Olfr46"
                     /note="olfactory receptor MOR253-8;
                     GA_x6K02T2PBJ9-42759973-42760905"
                     /codon_start=1
                     /product="olfactory receptor 46"
                     /protein_id="NP_667145.1"
                     /db_xref="CCDS:CCDS21981.1"
                     /db_xref="GeneID:18345"
                     /db_xref="MGI:MGI:1333824"
                     /translation="MNWILHSTMVSPNQTVVTEFVLQGFSEHPSLRLFLMGCFLSLYT
                     VALMGNMVIIALITSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISF
                     KGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICLPLHYSSRMSPQLCGTFAVGVWSIC
                     ALNASINTGLMTRLSFCGPKVITHFFCEIPPLLLLSCSPTYINSVMTLVADAFYGGIN
                     FLLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVSVYYSSVFCAYISPGSSYSP
                     ERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALRRLFPSFSN"
ORIGIN      
        1 caaaagactt ggtgcttgca agagagaaag tcagtgctca gcacagtggt cactgtgtgg
       61 gagccatctg tcacttcaat tcactgggac agagacgggc tactatgaat acagcagtga
      121 tgagcatgta agaacaagtg ttccttcatt aagaaaattg tgagatcaac atgtttcaaa
      181 atcagacttt agcataataa agtatatttt ctcagaagcc aatccatacc tctatgaact
      241 ggatactcca ctcaacaatg gtcagtccca accagacagt agtgacagag tttgtgctgc
      301 aagggttctc agagcaccca agtctaagac tgttcctgat gggctgtttc ctgtccctgt
      361 acacagtggc tttaatgggc aacatggtga tcattgcttt gatcacctca agcactgggc
      421 tccacagtcc catgtacttt ttcctgtgca acttagcgac catggatatt atctgcacct
      481 cctctgtact gcccaaggcg ctggttggtc tactgtctga ggaaaacacc atctccttca
      541 aagggtgcat gactcagctc ttctttcttg tgtggtctgg atcctctgag ctgctgctgc
      601 tcacagtcat ggcctatgac cgctatgtgg ccatctgttt gcccctgcat tacagctcta
      661 ggatgagtcc acagctctgt gggacctttg ccgtgggtgt atggtccatc tgcgcactaa
      721 atgcatctat caacactggt ctgatgacac ggctgtcatt ctgtggcccc aaggtcatca
      781 cccacttctt ctgtgagatt cccccactcc tcctgctctc ctgtagtcct acatatataa
      841 atagcgttat gactcttgtg gcagatgcct tttatggagg catcaatttt ttacttacct
      901 tgctatccta tggctgcatc attgccagca tcctgcgcat gcgttctgct gagggcaaga
      961 ggaaggcctt ttctacctgc tcatcccacc tcatcgtggt ctctgtgtac tactcatctg
     1021 tgttctgtgc ctatatcagt cctggttcca gctacagccc agaaagaagc aaatttacct
     1081 cggttttgta ctcagtcctc agcccaaccc tcaaccccct catctataca ctgaggaaca
     1141 aggatgtcaa gcttgccctg agaagactct tcccctcttt ctcaaattaa
//
