LOCUS       NM_146520               3915 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 12 subfamily J member 5
            (Or12j5), mRNA.
ACCESSION   NM_146520
VERSION     NM_146520.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3915)
  AUTHORS   Raja,R., Dumontier,E., Phen,A. and Cloutier,J.F.
  TITLE     Insertion of a neomycin selection cassette in the Amigo1 locus
            alters gene expression in the olfactory epithelium leading to
            region-specific defects in olfactory receptor neuron development
  JOURNAL   Genesis 62 (2), e23594 (2024)
   PUBMED   38590146
REFERENCE   2  (bases 1 to 3915)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3915)
  AUTHORS   Zhang,X., Rodriguez,I., Mombaerts,P. and Firestein,S.
  TITLE     Odorant and vomeronasal receptor genes in two mouse genome
            assemblies
  JOURNAL   Genomics 83 (5), 802-811 (2004)
   PUBMED   15081110
REFERENCE   4  (bases 1 to 3915)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   5  (bases 1 to 3915)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   6  (bases 1 to 3915)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC051116.1.
            
            On Dec 20, 2003 this sequence version replaced NM_146520.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC051116.1, BQ715218.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3915
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 85.61 cM"
     gene            1..3915
                     /gene="Or12j5"
                     /gene_synonym="MOR252-1; MOR252-4; Olfr536"
                     /note="olfactory receptor family 12 subfamily J member 5"
                     /db_xref="GeneID:258513"
                     /db_xref="MGI:MGI:3030370"
     exon            1..37
                     /gene="Or12j5"
                     /gene_synonym="MOR252-1; MOR252-4; Olfr536"
                     /inference="alignment:Splign:2.1.0"
     exon            38..87
                     /gene="Or12j5"
                     /gene_synonym="MOR252-1; MOR252-4; Olfr536"
                     /inference="alignment:Splign:2.1.0"
     exon            88..157
                     /gene="Or12j5"
                     /gene_synonym="MOR252-1; MOR252-4; Olfr536"
                     /inference="alignment:Splign:2.1.0"
     exon            158..3853
                     /gene="Or12j5"
                     /gene_synonym="MOR252-1; MOR252-4; Olfr536"
                     /inference="alignment:Splign:2.1.0"
     CDS             249..1172
                     /gene="Or12j5"
                     /gene_synonym="MOR252-1; MOR252-4; Olfr536"
                     /note="olfactory receptor MOR252-1;
                     GA_x6K02T2PBJ9-42653501-42652578; olfactory receptor 536"
                     /codon_start=1
                     /product="olfactory receptor family 12 subfamily J member
                     5"
                     /protein_id="NP_666731.1"
                     /db_xref="CCDS:CCDS21979.1"
                     /db_xref="GeneID:258513"
                     /db_xref="MGI:MGI:3030370"
                     /translation="MAPVNQSAITMFILQNFVDDPWIQDVLFCLLFALFMAAIAGNGL
                     IIATIHSSPNLHTPMYFFLVNLALMDMICTVTVLPKVLQSLVAENSISYGGCLIQMFV
                     FSWVLGSELLLFSAMAYDRYLAICRPLHYGTLMSGRVCVALATFVWFIGALNSLVLTC
                     LVLPLSFCGSNLIAHFFCEIPSVLILSCSPTFINNVMTVIADMFLTGLNFLLTMTSYV
                     FIISSILRIRSAEGKKRAFSTCSAHLVVVTLYYSTALYTYVRPALGTAGLLDKVIAIP
                     YTTVTPSLNPLIYTLRNKEFKTSFKKLLFPR"
ORIGIN      
        1 ctcaggacca aggcatccct gaagcccaaa tggtgtgatt tccacatact ttgctgaaca
       61 cccagccaca tgcctatgag cgtacaggct gtctagacag cacagacagc aagttgctct
      121 tgaccccctg caaggccact gtgggcaact attagagaac aggttcctca ttacacagag
      181 ttgatggttt cctgaaattt aaaaggcttt tttgagcaat tcctgtcctg agactagagg
      241 tgcttcccat ggctccagtg aaccagtcag ctataaccat gttcatcctg caaaacttcg
      301 ttgatgaccc ctggatccag gatgttctct tctgcctcct ctttgccttg tttatggcag
      361 ccatagctgg caatggcctg atcatcgcca ccattcacag cagtcccaac ctccacactc
      421 ccatgtactt cttcctagtc aaccttgccc tgatggatat gatctgcact gtgactgtct
      481 tgcccaaagt cctgcagagc ctggtggcag agaacagcat atcttatgga ggatgcctca
      541 tacagatgtt tgtcttctcc tgggtcctgg gctctgagct tctgcttttc tctgccatgg
      601 cctatgaccg ctaccttgca atctgtcggc cactgcacta tggtaccctc atgagtggca
      661 gggtctgtgt ggcccttgca acctttgtgt ggttcattgg agctctcaat tccttggtgc
      721 tcacttgtct ggtgttgcca ctgtctttct gtggttccaa tctcattgca cacttcttct
      781 gtgagatccc ttctgtattg atactgtcct gcagtcccac ctttatcaac aatgtcatga
      841 ctgtcattgc agacatgttc ctgacaggcc tgaacttcct gttgactatg acatcctatg
      901 tcttcatcat ttccagcatc ctgcgcatcc gctcagctga gggcaagaag cgtgccttct
      961 ccacctgctc tgcccacctg gttgtggtca ccctttatta ctctactgct ctatatactt
     1021 atgtccgacc agccctagga actgctgggc tcctggacaa ggtcattgct attccgtaca
     1081 caactgtgac cccatctctg aaccccctta tctatactct gagaaacaag gaattcaaaa
     1141 catcctttaa aaaactttta tttccccgtt gatgactttg agcttggaga agagctggca
     1201 aggagctcaa gggatcactg aaaccttcct ttctgtaaca tctgactccg gagggcacag
     1261 gctaagttat agcctgggac agctgtccaa agtctgtata cagaaaatca tgctgtctac
     1321 aagatgtttt agtaagcttt agccatttct acttcataca tagatgtgtg tgcttataag
     1381 ttcaatgctc ttaaatgtta agatgcttct atgactgaac caaatgtagt taaatattga
     1441 gtatagtcct tttaatgacc tatttaaaat tccctgatcc tctgtgtcac tggctgcaag
     1501 tgaatgctta tagagataaa gaaacatgac tccctctgct cccacccccg ccatacacac
     1561 atctgctctg agcatttgct ggcctgattt ggctgttttc atctttctta ttcttatctc
     1621 acagtttaca ctggtgcttg gatcatttaa tagttgaagg aaggaaacta ataaacaaac
     1681 tgagttaggg ctgggtatgg gggcctagga tctctatgga aatgtctctg atctcaagac
     1741 acagattgga gttagacact ggcatggtgg cttcttctca gatctgatgc cattgcaaag
     1801 atttgctaag tcataactaa tttgtacttc agcatttctc ctgctgtgtg agttttgtgt
     1861 gacatgacca ttcttcacgg gttattatta ttcaacactg catgttgtct gtaatgttca
     1921 cctgatacga gctctgtttc actgcaaaag gagctcagaa atagagtttt tcagatgggt
     1981 tcatgttgat gtgagcattt tgagcattaa acccattgtg gtgtttgcct atatgtggta
     2041 gagagtcatg caactaatgc agaagaaatg gcaacaaaca caaaacaaca acaataacaa
     2101 caacatacat acatacatac atgcatacat acatacatac atgattaaga gatgaggtaa
     2161 acaggatggg ggaaaataac aggaaaaaca agactgggtc aatgaaccat ggctgtgatg
     2221 attaatatat tcagttattt tgactagact aacctctaaa aatattgatg agaggccctc
     2281 tatgagtatc tgtaaatgtt ttctgaagag gatccactga gcagctgtaa cccatctcca
     2341 gtgtggttag caccatgaca tgcactgtgg acaggcaaga atgggaccag gtggaaggag
     2401 aaactagctt aacttcctcc attctctgtc tgctcaatga ctgcagagtc aaggcaaaaa
     2461 taaggaaaga aaataaagac ttcctgggaa tcaatgaaaa tgaatccaca atatacccaa
     2521 attagggaac acaacgaaag caatgctaag aggagcatac atagcactac ataggtaaat
     2581 aaagttggag agatcgccta ctagcaaatt aagaaaagaa ctgaaactcc agaatactgc
     2641 aggactaggt gtctcctttc cctctgaggc cagacaaggc agcctagtta gaggaacagt
     2701 attcaaaggc aggtaacaga cttacggatg gcccttgctc cagttgttgg cacacccccg
     2761 aatggagact gaactgcaca tatgttacat gtgtgtgtgg cggggaggta ggagatagcc
     2821 catgtatgct ttttggctgg tggttcaatc tctgggagtc accaagggtc caggccagtt
     2881 gactctgttg atcttcctat ggggttccta tcctatctgg gtccctcaat ctttctccct
     2941 attcttccac aagactcctg gagctctgtc taatgtttgg ctatgggtcc ctgcatctct
     3001 ttctgtgagc tgctggcagt agcctcctag aggacagtta tactgagatc ttgtctgcaa
     3061 gcataacaga gtatcattag tagtgtcagg aattggttct tgcccgtggg atggctttca
     3121 agttgggcct gtcattagtt ggccattccc tcagtccctg ctccatcttt aaccctgcac
     3181 ttcttgtagg caggagaaat tttgggtcaa agattttatg gggttgaagt cattatccct
     3241 ccactggggg ttctgcctgg ctacaggatg tggcaatttc aggttgcata tccccactgc
     3301 taggagtctt agctagagtc actcccatag actcctggga atcttgccca tcccaggtct
     3361 ctggcatgtc ctagagatgc cccccatccc tgccagctgc agattcccat tcactctcct
     3421 ggccttctct cctagtcttt ccccacacct gattctgatt cccttttccc cattcccatg
     3481 ccacccagtt ccctctcttc atctgtgtcc aatgactatt ttattcccct tctgaatgag
     3541 atttaagcat ccttgcttgg atcaatcttt ttatttagct tgtttaggtc tgtggatttt
     3601 agtgtgtgta tcctatactt aatgactaat aaccacttat aaatgagtat gtaccatgca
     3661 tgtcctttaa tgtctgggtt acctcactcg ggatgatatt ttctaatttc atccatttac
     3721 ctgcaattgt ttttaatagc tgagtggtat tccattgtat aaatgaacca cattttctgt
     3781 atccattctt tggttgaggg gcacctaagt tgttctgttt ctggctatta tgaataaagc
     3841 tgctatgaat ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3901 aaaaaaaaaa aaaaa
//
