LOCUS       NM_001360353            2909 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Mus musculus olfactory receptor family 10 subfamily D member 5J
            (Or10d5j), transcript variant 1, mRNA.
ACCESSION   NM_001360353 XM_006510348
VERSION     NM_001360353.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Olender,T., Jones,T.E.M., Bruford,E. and Lancet,D.
  TITLE     A unified nomenclature for vertebrate olfactory receptors
  JOURNAL   BMC Evol Biol 20 (1), 42 (2020)
   PUBMED   32295537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Young,J.M., Shykind,B.M., Lane,R.P., Tonnes-Priddy,L., Ross,J.A.,
            Walker,M., Williams,E.M. and Trask,B.J.
  TITLE     Odorant receptor expressed sequence tags demonstrate olfactory
            expression of over 400 genes, extensive alternate splicing and
            unequal expression levels
  JOURNAL   Genome Biol 4 (11), R71 (2003)
   PUBMED   14611657
REFERENCE   3  (bases 1 to 2909)
  AUTHORS   Young,J.M., Friedman,C., Williams,E.M., Ross,J.A., Tonnes-Priddy,L.
            and Trask,B.J.
  TITLE     Different evolutionary processes shaped the mouse and human
            olfactory receptor gene families
  JOURNAL   Hum Mol Genet 11 (5), 535-546 (2002)
   PUBMED   11875048
  REMARK    Erratum:[Hum Mol Genet. 2002 Jul 1;11(14):1683.]
REFERENCE   4  (bases 1 to 2909)
  AUTHORS   Zhang,X. and Firestein,S.
  TITLE     The olfactory receptor gene superfamily of the mouse
  JOURNAL   Nat Neurosci 5 (2), 124-133 (2002)
   PUBMED   11802173
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159246.2.
            
            On Feb 1, 2018 this sequence version replaced XM_006510348.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK135940.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-219               AC159246.2         128041-128259       c
            220-2909            AC159246.2         121472-124161       c
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 21.23 cM"
     gene            1..2909
                     /gene="Or10d5j"
                     /gene_synonym="MOR224-10; Olfr976"
                     /note="olfactory receptor family 10 subfamily D member 5J"
                     /db_xref="GeneID:258364"
                     /db_xref="MGI:MGI:3030810"
     exon            1..219
                     /gene="Or10d5j"
                     /gene_synonym="MOR224-10; Olfr976"
                     /inference="alignment:Splign:2.1.0"
     exon            220..2909
                     /gene="Or10d5j"
                     /gene_synonym="MOR224-10; Olfr976"
                     /inference="alignment:Splign:2.1.0"
     CDS             233..1177
                     /gene="Or10d5j"
                     /gene_synonym="MOR224-10; Olfr976"
                     /note="isoform 1 is encoded by transcript variant 1;
                     olfactory receptor MOR224-10;
                     GA_x6K02T2PVTD-33657378-33656440; olfactory receptor 976"
                     /codon_start=1
                     /product="olfactory receptor 976 isoform 1"
                     /protein_id="NP_001347282.1"
                     /db_xref="CCDS:CCDS90535.1"
                     /db_xref="GeneID:258364"
                     /db_xref="MGI:MGI:3030810"
                     /translation="MSMRNHTSVTEFILLGISNTEGLESMLFALFLVFYVFALLGNLL
                     IFLTILASPNLHTPMYFFLGNLAVFDIFFPSVNSPKMMDYLVRQGRTISYQGCASQIF
                     FYHTLGCTECFLYTVMAYDRFVAICYPMRYTVIMNPRVCTCFTVGTWLGGFVHGSILT
                     FLIFKLPYCGPNEVDSFFCDIPVVLSLACADTSLAQTVSFTNVGVVALTCFLLVLTSY
                     TRIVISILKIRSSEGRRRAFSTCSAHFTSILLFYGPVILVYLRPASSPWLDSVVQVFN
                     NVVTPSLNPLIYSLRNKEVKLALRKMLSQAMQPLGYKE"
ORIGIN      
        1 agaaggatcc tgttgcagct ttgttcttcc tggccagttg ggcgcgcgca agaagtggtg
       61 ccgaaactca ggacaagaaa catcttcagg cacgagcgaa gaccctctgc tacagggagg
      121 attcagaact gcatcatggg gaaggagcgg ttaataaagg ttcccataaa acagactgtt
      181 gagaaggatc catcgtggat tcagaactct tcagtactgg gctgcctgtg ccatgagcat
      241 gaggaaccac acctctgtga cagagttcat cctgctggga atttccaaca ctgaaggact
      301 agagagcatg ctgtttgcct tgttcctggt cttttatgtc tttgccttgt tgggaaacct
      361 gctcatcttc ctcaccatcc tggcttctcc caacctccac acccccatgt atttcttcct
      421 ggggaacctg gcagtgtttg acatattctt cccttctgtg aattctccta agatgatgga
      481 ctacctagta cggcaaggcc gaaccatctc ataccagggt tgtgcctcac agattttctt
      541 ctatcacacc ctgggctgta ctgagtgctt cctgtataca gtgatggctt atgaccgctt
      601 tgtggctatt tgttacccta tgagatatac ggtcatcatg aaccccaggg tgtgtacctg
      661 ctttacagtg ggcacttggc tggggggctt tgtccatggg agcatcctca catttcttat
      721 ctttaagtta ccctactgtg gccccaatga ggtagacagt ttcttctgtg acattcctgt
      781 ggtgctgtcc ctggcatgtg cagacacctc cctagcgcag actgtgagtt ttactaatgt
      841 tggcgttgtt gcgctcacat gttttctcct tgttctcact tcttacactc gtattgttat
      901 ctccatcctg aaaatccgtt cctcagaagg aaggcgcaga gccttctcga cctgcagtgc
      961 ccacttcaca tccattctgt tgttctatgg tcccgtgatt ctcgtgtatc tcagacctgc
     1021 ttctagtccc tggctggatt ctgttgtcca ggtgtttaat aatgttgtca ccccttcctt
     1081 gaatcctctg atttattctt tgagaaacaa ggaagtgaaa ttagccctga gaaagatgtt
     1141 aagtcaagca atgcaacctt tggggtataa ggaatagaaa caatcatttc ctatattatt
     1201 tgaatattgt ttagcatttt ctcttcatga gttactgttg ccaaatgagt cagctgaaca
     1261 aatctagttc ttggaagtct cacaaggcag ggtttacttg ggccgatatg tgaatttagc
     1321 actggaaaga agactttgca aattaactca gtgttcttaa ttaattgtaa tatgccaaaa
     1381 caatgagtcc ttttgctctg caaagtctct atgtggattt cagttttgac tttaaaaaat
     1441 tttttttaat gaaactgaac ctttctagaa gctgttgagt accttatatt cctctcaatt
     1501 cctctgatca ctcctttcca aaattctctt tccatattct actaaatgcc acttcggcta
     1561 ctcagttaaa ctcatcgcca ttaataaggt atggagtttg gaactaagat agaagttagt
     1621 aaatgtgtct ttatcctgtc aatcatgaaa atcagcaaag ttaggaggga aatcaatcca
     1681 tgtatgagag acatcaaggt caaatatcct caagaatgtt ctctactatc tgacaagatg
     1741 ctgtcttagt gagtaaagtc caagggtgtt ggtctgcctg ttatgagctg tgattggtat
     1801 gagaaaatta aattttgcac aataaagtac tcaggttctt ccaggaggca agaggcactg
     1861 atagatgatc ctggtgtgcc tagtccccac tcagaactca acatttggga cacaaatgtt
     1921 ggtgttaaag aaatcagtgt aatccagaag cctgaccatg agaaggtgga tagggctgca
     1981 ttctcctaaa gttcatctca gagccttagg caggccaggg cacttatgca aatcaataaa
     2041 gtgggaccgt gtgcaagggc tacaccatag agtggttttg ccatctaagg tctgtccttt
     2101 tcacattgtt gttaatggaa aattcatgag taactatcag ttttccatcc cctgaaattc
     2161 tcttaaattc cttagatgga caccttgttt acctgcaagt ttaatattat ttcaccttta
     2221 actgaagaag tcagcagttc cagtgattat cgaaagacaa tcattgtatt gagatttgta
     2281 aaactaaaag aagtttatta agtggtctta gcatccttgt ctaattgttt ctttttcttg
     2341 aaatatttga agccatgata tagcattttg actactaaaa gatgatttta aaaattatag
     2401 tacttgtgaa aacaaaaaat gaacaactga ataagaaaca atgtacagag cagttcatct
     2461 gaaatttggt agtgtaaaat gttgctcaca ttgtacttac aatatggttt cacacacagt
     2521 gacagcaact aatggatttt agcccagaac agagactgat tcaaccctaa gaccagcacg
     2581 tgcctgggga agtctgtaga agaaggttca gttgaaaacc caggtgtgga tttacctact
     2641 accctgtttt agacgagggc taaaatgcag tcttagtgcc ctgagataat gctagcccat
     2701 gctggaattt ttctgtgaca acactttgct gacaaattca tttgctgcat ctttctcctc
     2761 ctgacacaat gtttacttgg atgattttgt ctttggcgat caatggcacc atctactgag
     2821 acaatcatta ctctatgtaa actgggagaa taaattccta aacattgtgg ggtaaagaat
     2881 gttgtagagt cagaagtttt cattttttg
//
