LOCUS       XM_006512437            1964 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus opioid receptor, mu 1 (Oprm1), transcript
            variant X1, mRNA.
ACCESSION   XM_006512437
VERSION     XM_006512437.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006512437.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..1964
                     /gene="Oprm1"
                     /gene_synonym="M-OR-1; MOP-R; mor; MOR-1; MOR-1O; muOR;
                     Oprm"
                     /note="opioid receptor, mu 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 11 long SRA reads, 66 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18390"
                     /db_xref="MGI:MGI:97441"
     CDS             397..1605
                     /gene="Oprm1"
                     /gene_synonym="M-OR-1; MOP-R; mor; MOR-1; MOR-1O; muOR;
                     Oprm"
                     /codon_start=1
                     /product="mu-type opioid receptor isoform X1"
                     /protein_id="XP_006512500.1"
                     /db_xref="GeneID:18390"
                     /db_xref="MGI:MGI:97441"
                     /translation="MDSSAGPGNISDCSDPLAPASCSPAPGSWLNLSHVDGNQSDPCG
                     PNRTGLGGSHSLCPQTGSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTA
                     TNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCT
                     MSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCT
                     LTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLR
                     RITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPV
                     LYAFLDENFKRCFREFCIPTSSTIEQQNSARIRQNTREHPSTANTVDRTNHQRHGAVW
                     AHAAQYITLS"
ORIGIN      
        1 cctttacacg gaagtgcata gagactgagg aggctgattc tgagttgctt tgcgcacaat
       61 ccactccttc tctctcctcc ctcccctcta gcctctggat ccctcacagc ccatgctccc
      121 tcccttccac tcagagagtg gcgctttggg gatgctaagg atgcgcctcc gtgtacttct
      181 aaggtgggag ggggctacaa gcagaggaga atatcggacg ctcagacgtt ccattctgcc
      241 tgccgctctt ctctggttcc actagggctt gtccttgtaa gaaactgacg gagcctaggg
      301 cagctgtgag aggaagaggc tggggcgcct ggaacccgaa cactcttgag tgctctcagt
      361 tacagcctac cgagtccgca gcaagcattc agaaccatgg acagcagcgc cggcccaggg
      421 aacatcagcg actgctctga ccccttagct cctgcaagtt gctccccagc acctggctcc
      481 tggctcaact tgtcccacgt tgatggcaac cagtccgacc catgcggtcc taaccgcacg
      541 gggcttggcg ggagccacag cctgtgccct cagaccggca gcccttccat ggtcacagcc
      601 atcaccatca tggccctcta ttctatcgtg tgtgtagtgg gcctctttgg aaacttcctg
      661 gtcatgtatg tgattgtaag atataccaaa atgaagactg ccaccaacat ctacattttc
      721 aaccttgctc tggcagatgc cttagccact agcacgctgc cctttcagag tgttaactac
      781 ctgatgggaa cgtggccctt tggaaacatc ctctgcaaga tcgtgatctc aatagactac
      841 tacaacatgt tcaccagtat cttcaccctc tgcaccatga gtgtagaccg ctacattgcc
      901 gtctgccacc cggtcaaggc cctggatttc cgtacccccc gaaatgccaa aattgtcaat
      961 gtctgcaact ggatcctctc ttctgccatt ggtctgcccg taatgttcat ggcaaccaca
     1021 aaatacaggc aggggtccat agattgcacc ctcacgttct ctcatcccac atggtactgg
     1081 gagaacctgc tcaaaatctg tgtcttcatc ttcgccttca tcatgccggt cctcatcatc
     1141 actgtgtgtt atggactgat gatcttacga ctcaagagtg tccgcatgct gtcgggctcc
     1201 aaagaaaagg acaggaacct gcgcaggatc acccggatgg tgctggtggt cgtggctgta
     1261 tttattgtct gctggacccc catccacatc tatgtcatca tcaaagcact gatcacgatt
     1321 ccagaaacca ctttccagac tgtttcctgg cacttctgca ttgccttggg ttacacaaac
     1381 agctgcctga acccagttct ttatgcgttc ctggatgaaa acttcaaacg atgttttaga
     1441 gagttctgca tcccaacttc ctccacaatc gaacagcaaa actctgctcg aatccgtcaa
     1501 aacactaggg aacacccctc cacggctaat acagtggatc gaactaacca ccagagacat
     1561 ggtgctgttt gggcacatgc agcccaatat ataacactgt cctgatgcag cctaccagga
     1621 ggccctcgcc cctcatcctc tactttaaat ccacactcca tacagaaatg ctgggatcct
     1681 cctatatgct gagtcttctt catggcttcc ctcatcattc accatgctct caagaacccc
     1741 agctccattt gctggtcctc caccaccatg ctacctccct gtatagaagg ctggccccat
     1801 ggaaagactg gcaatctcaa ctgactggac ccatgagatc tctcagacac tgggccacta
     1861 accaggcagc ctacaccagc taatgaggca catatgcaac atatgcaaca gaagattgcc
     1921 tagtctggcc tcattgagag aagatgcacc taaccctgga gaga
//
