LOCUS       NM_139226               4705 bp    mRNA    linear   ROD 24-DEC-2024
DEFINITION  Mus musculus one cut domain, family member 3 (Onecut3), mRNA.
ACCESSION   NM_139226 XM_987071
VERSION     NM_139226.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4705)
  AUTHORS   Renaux,E., Baudouin,C., Schakman,O., Gay,O., Martin,M.,
            Marchese,D., Achouri,Y., Rezsohazy,R., Gofflot,F. and Clotman,F.
  TITLE     Arid3c identifies an uncharacterized subpopulation of V2
            interneurons during embryonic spinal cord development
  JOURNAL   Front Cell Neurosci 18, 1466056 (2024)
   PUBMED   39479525
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4705)
  AUTHORS   Zupancic,M., Keimpema,E., Tretiakov,E.O., Eder,S.J., Lev,I.,
            Englmaier,L., Bhandari,P., Fietz,S.A., Hartig,W., Renaux,E.,
            Villunger,A., Hokfelt,T., Zimmer,M., Clotman,F. and Harkany,T.
  TITLE     Concerted transcriptional regulation of the morphogenesis of
            hypothalamic neurons by ONECUT3
  JOURNAL   Nat Commun 15 (1), 8631 (2024)
   PUBMED   39366958
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4705)
  AUTHORS   Butts,J.C., Wu,S.R., Durham,M.A., Dhindsa,R.S., Revelli,J.P.,
            Ljungberg,M.C., Saulnier,O., McLaren,M.E., Taylor,M.D. and
            Zoghbi,H.Y.
  TITLE     A single-cell transcriptomic map of the developing Atoh1 lineage
            identifies neural fate decisions and neuronal diversity in the
            hindbrain
  JOURNAL   Dev Cell 59 (16), 2171-2188 (2024)
   PUBMED   39106860
REFERENCE   4  (bases 1 to 4705)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4705)
  AUTHORS   Romanov,R.A., Tretiakov,E.O., Kastriti,M.E., Zupancic,M.,
            Haring,M., Korchynska,S., Popadin,K., Benevento,M., Rebernik,P.,
            Lallemend,F., Nishimori,K., Clotman,F., Andrews,W.D.,
            Parnavelas,J.G., Farlik,M., Bock,C., Adameyko,I., Hokfelt,T.,
            Keimpema,E. and Harkany,T.
  TITLE     Molecular design of hypothalamus development
  JOURNAL   Nature 582 (7811), 246-252 (2020)
   PUBMED   32499648
REFERENCE   6  (bases 1 to 4705)
  AUTHORS   Vanhorenbeeck,V., Jenny,M., Cornut,J.F., Gradwohl,G.,
            Lemaigre,F.P., Rousseau,G.G. and Jacquemin,P.
  TITLE     Role of the Onecut transcription factors in pancreas morphogenesis
            and in pancreatic and enteric endocrine differentiation
  JOURNAL   Dev Biol 305 (2), 685-694 (2007)
   PUBMED   17400205
REFERENCE   7  (bases 1 to 4705)
  AUTHORS   Pierreux,C.E., Vanhorenbeeck,V., Jacquemin,P., Lemaigre,F.P. and
            Rousseau,G.G.
  TITLE     The transcription factor hepatocyte nuclear factor-6/Onecut-1
            controls the expression of its paralog Onecut-3 in developing mouse
            endoderm
  JOURNAL   J Biol Chem 279 (49), 51298-51304 (2004)
   PUBMED   15381696
  REMARK    GeneRIF: hepatocyte nuclear factor-6/Onecut-1 controls the
            expression of its paralog Onecut-3 in developing mouse endoderm
REFERENCE   8  (bases 1 to 4705)
  AUTHORS   Jacquemin,P., Pierreux,C.E., Fierens,S., van Eyll,J.M.,
            Lemaigre,F.P. and Rousseau,G.G.
  TITLE     Cloning and embryonic expression pattern of the mouse Onecut
            transcription factor OC-2
  JOURNAL   Gene Expr Patterns 3 (5), 639-644 (2003)
   PUBMED   12971999
REFERENCE   9  (bases 1 to 4705)
  AUTHORS   Vanhorenbeeck,V., Jacquemin,P., Lemaigre,F.P. and Rousseau,G.G.
  TITLE     OC-3, a novel mammalian member of the ONECUT class of transcription
            factors
  JOURNAL   Biochem Biophys Res Commun 292 (4), 848-854 (2002)
   PUBMED   11944891
REFERENCE   10 (bases 1 to 4705)
  AUTHORS   Tissir,F., De-Backer,O., Goffinet,A.M. and Lambert de Rouvroit,C.
  TITLE     Developmental expression profiles of Celsr (Flamingo) genes in the
            mouse
  JOURNAL   Mech Dev 112 (1-2), 157-160 (2002)
   PUBMED   11850187
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC058700.1.
            
            On or before May 4, 2006 this sequence version replaced
            XM_987071.1, NM_139226.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058700.1, AY080897.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849376, SAMN00849377
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4705
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..4705
                     /gene="Onecut3"
                     /gene_synonym="OC-3; Oc3"
                     /note="one cut domain, family member 3"
                     /db_xref="GeneID:246086"
                     /db_xref="MGI:MGI:1891409"
     exon            1..1285
                     /gene="Onecut3"
                     /gene_synonym="OC-3; Oc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             103..1575
                     /gene="Onecut3"
                     /gene_synonym="OC-3; Oc3"
                     /note="one cut homeobox 3; transcription factor ONECUT-3"
                     /codon_start=1
                     /product="one cut domain family member 3"
                     /protein_id="NP_631972.2"
                     /db_xref="CCDS:CCDS24023.1"
                     /db_xref="GeneID:246086"
                     /db_xref="MGI:MGI:1891409"
                     /translation="MELSLESLGGLHGVTHAQAGELLSPGHARSAAAQHRSLVASGRP
                     GLVAGMASLLDGGGAGGGGAGGAGAAGAAGGGPDFRGELAGPLHPAMGMACEAPGLGG
                     TYTTLTPLQHLPPLAAVADKFHQHAVAGAHGGHPHAHPHPATAPPPPPPQRLAASVSG
                     SFTLMRDERAALASVGHLYGPYGKELPTMGSPLSPLPSALPPALHSAPQPPPPPPLAA
                     YGAPGHLAGDKLLPPAAFEPHAALLGRAEDALARGLPGGGGGAGGGGAAGGAAAGLLA
                     PLGGLAAAGAHGPHSGGGGPGGGGGAGGGSGGPGAGAAAEEINTKEVAQRITAELKRY
                     SIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALR
                     LAACKRKEQDQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQATISQQLGL
                     ELNTVSNFFMNARRRCMNRWAEEPGATPGTGTATATFSKA"
     exon            1286..4695
                     /gene="Onecut3"
                     /gene_synonym="OC-3; Oc3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cactgaacaa gcgggacagt agcagccgcc gccaccagga gcgtcggcca gtgcgtgggg
       61 accatgctgc ggccttgagc acacacgaag aggacaccca ggatggagtt gagcttggag
      121 agcctcgggg ggctgcacgg ggtgacacac gcgcaagccg gcgagctgct gagcccgggc
      181 cacgcgcgct ccgccgcggc ccaacaccga agcctagtgg catcggggcg cccaggcctg
      241 gtggccggca tggctagcct gctggacggt ggtggcgccg ggggcggggg cgccgggggc
      301 gcgggggctg caggggccgc gggtggtggc cctgacttcc gtggggagct ggctggcccc
      361 ctgcacccgg ccatgggtat ggcgtgcgag gccccaggtt tgggtggcac ctacaccacg
      421 ctcacgccct tgcagcacct gccgccgctg gccgccgtgg ccgataagtt ccaccagcac
      481 gcggtggctg gggcgcacgg aggccatcca cacgctcacc ctcacccggc caccgcgccg
      541 ccaccgcccc ctccgcagcg cctggcggcc agcgtgagcg gcagcttcac cctcatgcgc
      601 gacgagcggg cggcgctggc ctcggtgggc cacctctacg ggccttatgg caaggagctg
      661 cccaccatgg ggtcgccact gtcgccgctg cccagcgcgc tgccccccgc tctgcacagc
      721 gccccgcagc cgccgccgcc gccaccgctc gccgcttacg gggctccggg ccacctggcc
      781 ggggacaaac tactgccacc tgccgccttc gagccacacg cggcgcttct ggggcgcgca
      841 gaggacgcgc tggcccgagg gctgcctgga ggcggcggcg gcgcgggagg cggcggggcg
      901 gccggcgggg cggccgcggg tttgctggct ccgctgggcg ggctggctgc ggccggggcg
      961 cacgggcctc actcaggcgg cggtggcccc ggagggggcg gtggcgctgg cggcggcagc
     1021 ggcggcccgg gagccggcgc tgcagccgaa gagatcaaca ccaaagaggt ggcccagcgc
     1081 atcaccgccg agctgaagcg ctacagcatc ccgcaggcca tcttcgcgca gcgcatcctg
     1141 tgccgctcgc agggcacgct ctccgacctg ctgcgcaacc cgaagccctg gagcaagctc
     1201 aaatccggcc gcgagacctt ccgcaggatg tggaagtggc tgcaggagcc ggagttccag
     1261 cgcatgtcgg cgctgcgcct ggcagcctgc aagcgtaaag agcaggatca gcagaaggag
     1321 agggctctgc agccgaagaa gcaacgcctc gtgttcacag acctgcagcg ccgcacgctg
     1381 attgccatct tcaaggagaa caagcggccg tccaaggaga tgcaagccac catctcgcag
     1441 cagctgggcc tggagctcaa cactgtcagc aacttcttca tgaacgcccg tcgccgctgc
     1501 atgaaccgct gggctgagga gccgggtgcc acccctggca ccgggacagc tactgccacc
     1561 ttctccaagg cctgagcctt tccgcagcac acacgctagc cccagggagc gaggggccgt
     1621 ccctgaacca gccaaagcaa gccctacccc cacccccagg ggacagggac ccctagcccc
     1681 ctcccgctca attttggact ccaaagggac cctgagggta gagtgggtca agaatcaagc
     1741 acatcttaca aacagaaccc gggtatttaa aaaatgattt taatagagaa cccttctttc
     1801 cagatcccag ccctcctcaa aagcaggagg cagacatctg cctgtcttcc cccactttct
     1861 ccaccaggcc aggtctctgt ttccttgtcc cctccccaaa aactgagacc catcccaagt
     1921 ggccaaaaca agctggatcc ttacagcatc cccatgccca atcctgccct ccgagccgcg
     1981 gccccacccc cacgcccact ccgcaggatg gcccctcaca gcagccaaga cccaccccag
     2041 ccgccacccc gaccccagcg gcctggatag cctgtgccaa caatcccctg ccttaacgcc
     2101 ggggagggaa gctgtgggga gccccctgtc tccaaggaga cagtggcaaa tgtgagatga
     2161 gggctgccct gtggatgcct ccatcccagc acccctggct gagttcacta taagcacctt
     2221 gctatgtgaa gaatgctaca cagggaacaa ggtcaccaga gagcaaagat gacaccccag
     2281 atctcaggag agggacatca gattctccca gatctggggg agccatgaag gcaccatcgg
     2341 tgtcccttgg atgcaaagtt ctggaaatct ctggaattca tcacccattt ttcaattgat
     2401 tggggtgcaa acctgagcgc cccttcagag gacattcagg ggtgagcctt gcattggtga
     2461 cacctctctc agaagagaga cgatgaagct gaaaactgct tgctccattg ttttgccaaa
     2521 aaaaaaaatg tacaatgggg aaaggtcaga cacgacgggg tcacccctct gctcagccct
     2581 ccagtctggg tgacatttca agactggcct ggcagccatg tcccaggagg ctgcctcttc
     2641 ccctccccct ctggggttca agatcctggg aatccctctc cattgaaccc tactcccatg
     2701 gctgcctccc agagaggccc ccccactccc aatttcccta gagaatgcaa gagaactttc
     2761 tagtgagaaa aagaaaaagg aaccttcccc atcctgtaaa ggctacctca ttgagcccac
     2821 gctgtgattc gaaagatcac gtttgatacc aaagatttcc ccacccctaa gggtttgtgc
     2881 tggaagccag ggtgtcccca ctttcacccc atggctgtcc cccaccctag agagagagag
     2941 agagagagag agagagagag agagagagag acaggaggac agcgaggtcg gcgagtgcct
     3001 ttttactgaa ccaaagatgt gtgtagagtg tcctctgtcc tcagtgattt gctgctctcc
     3061 cacaggagca gccaggatgg atgcttctag aaccttcggg tgtgaggcag aatgctcaga
     3121 gtgaaaagag tcccctgttc ccactcatca agtgacaggt ctccccagac acacccatgc
     3181 tggcagatac atacaagctc acacgcatac atgcacacac tcacacatgc acacacatat
     3241 gtgcacagct ggagagatgg ctcagtggtt aagagcacag gctggtcttg ttgaggaccc
     3301 agtttgggtc ctcagcaccc acatggagac tcacaaccac ccataactcc agtgccagag
     3361 gactaaatga cctcttctgg ccctcctagg tgcccacact cacatgcaca cacatatatg
     3421 attaaaaata cattttgctt ttgttttttg tttgtttgtt tgtttgtttg tttttcaaga
     3481 cagggttttt ctgtgtagtc ttggctgtcc tggaactcat tctgtagacc aggctggccc
     3541 tgaactcaga gatctcctgc ctctgcctcc tgagtgctgg gactaaaggc gtgtgccacc
     3601 actacccagc taagaaaatt taaaaagtgt aaaacacatg cagtatacac acacagccac
     3661 aggcacaaac acacagccac acatagacat gcacacacag gcacacacac gcacacagag
     3721 gcacacactc acaggcatat acacacagag gcacagacac acaggcacac acacgcacac
     3781 agaggcacac actcacaggc atatacacac agaggcacag acacacaggc acacacacgc
     3841 acacagagtg ctcccccttt cccttatatt cctgattcct agctccaaag ccaccctgcc
     3901 caccctgtac ccagcaggtg cagtgacatg tcctatgagc cagcagacta agactcacaa
     3961 catgagcact gaaaaaatga agtttgacat ggtgacatgg tgaccttaat cccagccctc
     4021 aggaggcaga ggctggcaga tggatctttg tgagttcaca tagtgagggc ctgcctcaaa
     4081 agttctatga ctcaatgaca agttagaatc tacacacaca aacacatatg cctcacttgt
     4141 gagatagggc ctctgtctgt agctaaggct agcctctagc ttgagatcct tctgcctcag
     4201 tcttccgaga gctgggatca caagcatgca tcatcaaacc gttctttctc cttgtctttt
     4261 tcttttctcc ttttgtttct ttttcttttg cttatggagg ttatggggat acagcctagg
     4321 acctagcaca ggctgggcaa gtatcacccc tgaccacgcc tccagcccct cctggaggat
     4381 tctaggctgg gctccatttc tgagtcacca ataaaagctt ttcaaattac acacacacac
     4441 acacacacac acacacacgc gcgcgtgcac acacacacac acacgcacac atgcacgcac
     4501 gcacacacac agatatcagt gcccctctaa gcccaggtgg acccccatcc ctccatctgc
     4561 ccttctggtc cttacccacc aaagatcttt cctacacagg gaacccatag tccagcacaa
     4621 ttccttctag cctttgacaa ttctctctga aatacctcaa aatatttaat gtatagttta
     4681 tgtgcttaaa aaaaaaaaaa aaaaa
//
