LOCUS       NM_008262               1824 bp    mRNA    linear   ROD 24-DEC-2024
DEFINITION  Mus musculus one cut domain, family member 1 (Onecut1), mRNA.
ACCESSION   NM_008262 XM_001004115
VERSION     NM_008262.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Renaux,E., Baudouin,C., Schakman,O., Gay,O., Martin,M.,
            Marchese,D., Achouri,Y., Rezsohazy,R., Gofflot,F. and Clotman,F.
  TITLE     Arid3c identifies an uncharacterized subpopulation of V2
            interneurons during embryonic spinal cord development
  JOURNAL   Front Cell Neurosci 18, 1466056 (2024)
   PUBMED   39479525
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Zupancic,M., Keimpema,E., Tretiakov,E.O., Eder,S.J., Lev,I.,
            Englmaier,L., Bhandari,P., Fietz,S.A., Hartig,W., Renaux,E.,
            Villunger,A., Hokfelt,T., Zimmer,M., Clotman,F. and Harkany,T.
  TITLE     Concerted transcriptional regulation of the morphogenesis of
            hypothalamic neurons by ONECUT3
  JOURNAL   Nat Commun 15 (1), 8631 (2024)
   PUBMED   39366958
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1824)
  AUTHORS   Deska-Gauthier,D., Borowska-Fielding,J., Jones,C., Zhang,H.,
            MacKay,C.S., Michail,R., Bennett,L.A., Bikoff,J.B. and Zhang,Y.
  TITLE     Embryonic temporal-spatial delineation of excitatory spinal V3
            interneuron diversity
  JOURNAL   Cell Rep 43 (1), 113635 (2024)
   PUBMED   38160393
REFERENCE   4  (bases 1 to 1824)
  AUTHORS   Hunter,A.L., Poolman,T.M., Kim,D., Gonzalez,F.J., Bechtold,D.A.,
            Loudon,A.S.I., Iqbal,M. and Ray,D.W.
  TITLE     HNF4A modulates glucocorticoid action in the liver
  JOURNAL   Cell Rep 39 (3), 110697 (2022)
   PUBMED   35443180
REFERENCE   5  (bases 1 to 1824)
  AUTHORS   Monica Shih,M.C., Huang,C.C., Chu,H.P., Hsu,N.C. and Chung,B.C.
  TITLE     Embryonic Steroids Control Developmental Programming of Energy
            Balance
  JOURNAL   Endocrinology 162 (12) (2021)
   PUBMED   34599818
REFERENCE   6  (bases 1 to 1824)
  AUTHORS   Rastegar,M., Szpirer,C., Rousseau,G.G. and Lemaigre,F.P.
  TITLE     Hepatocyte nuclear factor 6: organization and chromosomal
            assignment of the rat gene and characterization of its promoter
  JOURNAL   Biochem J 334 (Pt 3) (Pt 3), 565-569 (1998)
   PUBMED   9729463
REFERENCE   7  (bases 1 to 1824)
  AUTHORS   Rausa,F.M., Ye,H., Lim,L., Duncan,S.A. and Costa,R.H.
  TITLE     In situ hybridization with 33P-labeled RNA probes for determination
            of cellular expression patterns of liver transcription factors in
            mouse embryos
  JOURNAL   Methods 16 (1), 29-41 (1998)
   PUBMED   9774514
  REMARK    Erratum:[Methods 1998 Nov;16(3):359-60]
REFERENCE   8  (bases 1 to 1824)
  AUTHORS   Landry,C., Clotman,F., Hioki,T., Oda,H., Picard,J.J., Lemaigre,F.P.
            and Rousseau,G.G.
  TITLE     HNF-6 is expressed in endoderm derivatives and nervous system of
            the mouse embryo and participates to the cross-regulatory network
            of liver-enriched transcription factors
  JOURNAL   Dev Biol 192 (2), 247-257 (1997)
   PUBMED   9441665
REFERENCE   9  (bases 1 to 1824)
  AUTHORS   Rausa,F., Samadani,U., Ye,H., Lim,L., Fletcher,C.F., Jenkins,N.A.,
            Copeland,N.G. and Costa,R.H.
  TITLE     The cut-homeodomain transcriptional activator HNF-6 is coexpressed
            with its target gene HNF-3 beta in the developing murine liver and
            pancreas
  JOURNAL   Dev Biol 192 (2), 228-246 (1997)
   PUBMED   9441664
REFERENCE   10 (bases 1 to 1824)
  AUTHORS   Samadani,U. and Costa,R.H.
  TITLE     The transcriptional activator hepatocyte nuclear factor 6 regulates
            liver gene expression
  JOURNAL   Mol Cell Biol 16 (11), 6273-6284 (1996)
   PUBMED   8887657
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC100600.22
            and CT025657.12.
            
            On Nov 17, 2006 this sequence version replaced NM_008262.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC024053.1, U95945.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849377
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1481              AC100600.22        8618-10098          c
            1482-1824           CT025657.12        68537-68879
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 41.93 cM"
     gene            1..1824
                     /gene="Onecut1"
                     /gene_synonym="D9Ertd423e; Hfh12; HNF-6; Hnf6; Hnf6b;
                     OC-1; Oc1"
                     /note="one cut domain, family member 1"
                     /db_xref="GeneID:15379"
                     /db_xref="MGI:MGI:1196423"
     exon            1..1481
                     /gene="Onecut1"
                     /gene_synonym="D9Ertd423e; Hfh12; HNF-6; Hnf6; Hnf6b;
                     OC-1; Oc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             377..1774
                     /gene="Onecut1"
                     /gene_synonym="D9Ertd423e; Hfh12; HNF-6; Hnf6; Hnf6b;
                     OC-1; Oc1"
                     /note="one cut homeobox 1; HNF-3/forkhead homolog 12;
                     hepatic nuclear factor 6"
                     /codon_start=1
                     /product="hepatocyte nuclear factor 6"
                     /protein_id="NP_032288.1"
                     /db_xref="CCDS:CCDS23339.1"
                     /db_xref="GeneID:15379"
                     /db_xref="MGI:MGI:1196423"
                     /translation="MNAQLTMEAIGELHGVSHEPVPAPADLLGGSPHARSSVGHRGSH
                     LPPAHPRSMGMASLLDGGSGGSDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPTT
                     YTTLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLAS
                     MNNLYTPYHKDVAGMGQSLSPLSGSGLGSIHNSQQGLPHYAHPGAAMPTDKMLTPNGF
                     EAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNPSVT
                     GAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRNP
                     KPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKDRGNTPKKPRLVF
                     TDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDEGGS
                     NSGSSSSSSSTCTKA"
     exon            1482..1824
                     /gene="Onecut1"
                     /gene_synonym="D9Ertd423e; Hfh12; HNF-6; Hnf6; Hnf6b;
                     OC-1; Oc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctcgagctg gcgggcggca caggcaggca gcagccgcgg caggcgcacg ggccgcgtca
       61 agggagcctg gggcagcagg attctaagaa gaggggcgag agggggccgg gctgggtggg
      121 ctaggggtac cgcgctctcc caacagcacg ggtccttttt ggaaattaat attaaaagaa
      181 aaaaaaaaga cagaggggaa ggtgggagca agagagaagg caagacacac acagagagag
      241 cgagagacac agatccccac agtgagagga agaaaggcca cagtcgcagg cagccgatgt
      301 gaagactgga ctccttgcgc ccctcgccgc ctctgcccgg ccacatcgat gttgcagccc
      361 gctcgcccgc atcacgatga acgcacagct gaccatggag gcgatcggcg agctgcacgg
      421 ggtgagccat gagccggtgc ccgcccctgc tgacctgctg ggcggcagcc ctcacgcgcg
      481 cagctccgtg ggacaccgcg gcagccacct gcctcccgcg cacccgcgtt ccatgggcat
      541 ggcgtccctg ctggacggcg gcagcggagg cagcgattac caccaccacc accgcgcccc
      601 tgagcacagc ttggctggcc ccctgcaccc caccatgacc atggcctgtg aaactccccc
      661 aggtatgagc atgcccacca cctacactac cttaacccct ctgcagccgc tgccgcccat
      721 ctccaccgtg tccgacaagt tccctcacca tcatcaccac caccatcacc accaccaccc
      781 acaccaccac cagcgcctgg cgggcaacgt gagcggtagt ttcacactta tgcgggatga
      841 gcgcgggctg gcctctatga ataacctcta taccccctac cacaaggacg tggctggcat
      901 gggccagagc ctctcgcccc tctctggctc cggtctgggc agcattcaca actcccagca
      961 aggacttccc cactatgctc atcccggcgc ggctatgccc accgacaaga tgctcacccc
     1021 aaatggcttt gaagcccacc accctgccat gctcggtcgc cacggggagc agcacctcac
     1081 gcccacctcg gccggcatgg tacccatcaa cggccttcct ccgcaccatc ctcatgccca
     1141 cctgaatgcc cagggccacg gacagctcct gggcacagcc cgagagccca acccttcggt
     1201 gaccggcgcg caggtcagca atggaagtaa ttcagggcag atggaagaga tcaataccaa
     1261 agaggtggcg cagcgtatca ccaccgagct caaacgttac agcatcccac aggccatctt
     1321 cgcgcagagg gtgctctgcc gttcccaggg gaccctttcg gacctgctgc gaaaccccaa
     1381 gccctggagc aaactcaagt cgggtcggga gaccttccgg aggatgtgga agtggctgca
     1441 ggagccggag ttccagcgca tgtcggcgct ccgcttagca gcctgcaaac ggaaagagca
     1501 agaacacggg aaggacagag gcaacacccc caaaaagccc aggctggtct tcacagacgt
     1561 ccaacgtcga actctacatg caatattcaa ggaaaataag cgtccgtcca aagaattaca
     1621 aatcaccatc tcccagcagc tggggttgga gctgagcact gtcagcaact tcttcatgaa
     1681 tgccaggagg aggagtctgg acaagtggca ggacgagggc ggctccaact caggcagttc
     1741 atcgtcctca tcgagcactt gtaccaaagc atgagggagg aagaaccacg gactagtacc
     1801 tcggtggaaa agctttaaat taaa
//
