LOCUS       NM_001111286            1231 bp    mRNA    linear   ROD 15-OCT-2021
DEFINITION  Mus musculus oocyte maturation, alpha (Omt2a), transcript variant
            1, mRNA.
ACCESSION   NM_001111286 XM_001478815 XM_001480917 XM_001480918 XM_993248
VERSION     NM_001111286.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Tang F, Barbacioru C, Nordman E, Bao S, Lee C, Wang X, Tuch BB,
            Heard E, Lao K and Surani MA.
  TITLE     Deterministic and stochastic allele specific gene expression in
            single mouse blastomeres
  JOURNAL   PLoS One 6 (6), e21208 (2011)
   PUBMED   21731673
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Otsuka S, Konno A, Hashimoto Y, Sasaki N, Endoh D and Kon Y.
  TITLE     Oocytes in newborn MRL mouse testes
  JOURNAL   Biol Reprod 79 (1), 9-16 (2008)
   PUBMED   18354036
REFERENCE   3  (bases 1 to 1231)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   4  (bases 1 to 1231)
  AUTHORS   Popova NV and Morris RJ.
  TITLE     Genetic regulation of mouse stem cells: identification of two
            keratinocyte stem cell regulatory loci
  JOURNAL   Curr Top Microbiol Immunol 280, 111-137 (2004)
   PUBMED   14594209
REFERENCE   5  (bases 1 to 1231)
  AUTHORS   Popova NV, Teti KA, Wu KQ and Morris RJ.
  TITLE     Identification of two keratinocyte stem cell regulatory loci
            implicated in skin carcinogenesis
  JOURNAL   Carcinogenesis 24 (3), 417-425 (2003)
   PUBMED   12663500
REFERENCE   6  (bases 1 to 1231)
  AUTHORS   West MF, Verrotti AC, Salles FJ, Tsirka SE and Strickland S.
  TITLE     Isolation and characterization of two novel, cytoplasmically
            polyadenylated, oocyte-specific, mouse maternal RNAs
  JOURNAL   Dev Biol 175 (1), 132-141 (1996)
   PUBMED   8608859
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DV649105.1, DV648064.1 and AU015702.1.
            
            On Sep 1, 2009 this sequence version replaced NM_001111286.1.
            
            Transcript Variant: This variant (1) encodes the longer protein
            (isoform 1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY725801.1, AK139546.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-586               DV649105.1         1-586
            587-1158            DV648064.1         31-602
            1159-1231           AU015702.1         1-73                c
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 43.65 cM"
     gene            1..1231
                     /gene="Omt2a"
                     /gene_synonym="OM2a"
                     /note="oocyte maturation, alpha"
                     /db_xref="GeneID:18379"
                     /db_xref="MGI:MGI:106620"
     exon            1..722
                     /gene="Omt2a"
                     /gene_synonym="OM2a"
                     /inference="alignment:Splign:2.1.0"
     CDS             653..955
                     /gene="Omt2a"
                     /gene_synonym="OM2a"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="oocyte maturation, alpha isoform 1"
                     /protein_id="NP_001104756.1"
                     /db_xref="CCDS:CCDS52867.1"
                     /db_xref="GeneID:18379"
                     /db_xref="MGI:MGI:106620"
                     /translation="MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDE
                     GLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI"
     exon            723..893
                     /gene="Omt2a"
                     /gene_synonym="OM2a"
                     /inference="alignment:Splign:2.1.0"
     exon            894..1231
                     /gene="Omt2a"
                     /gene_synonym="OM2a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcatctcta ctcagacttt ggccccaagt tcagattcct ttacctcagg gtttggggca
       61 ttgggttcct cgtaggcagt cttgatttca gccactaagt agctaaatgc cttgagtgaa
      121 cctgaagtct gtacctggag tctacaatgc tagaccctgg aggttaggta gtgttgaggc
      181 tgcaagacag ggcatattgg aagaggagat gggcagttat gaagctatgg gctctttgcg
      241 gataagaaaa tcctcagagg ttgtgtgggc ctcatagcta gcagcctccc ctgactccta
      301 cttgtgctgc ccttggtcag agagagccat atttggctag ttcgttggca gaaaatccct
      361 gccaatgtgc aagctttgga gccttgagta attgtacaga tctgagccgg caggaatgtg
      421 tgcaaatgtt tgaaagaaga aatggagccc tgaccaatag gccagtgagc ctggaaccat
      481 agtgtgcctt gggggtgggg cttgggggtg gagagacagg aaagcagaca gaaggcagca
      541 tttagaagaa ggtgtagcca atctgaagat cttttgcagg gaagggtggt gatgtcttaa
      601 cttcaaatgt tatgggccct tatttgagat ctacactcac ctttcatctt tcatggacac
      661 tctggtattt acgaaagtgc acctggaatc gtgggtctac aaaggattgc gtggtcagca
      721 tgattcgatt cttgaactat tgaaggaaaa tttgcatcac tacctttgta ttgaatttga
      781 tgagggttta aatgacacag tcgtgtacat tattggattc aaattttttg caatgtttgc
      841 aatgtttgtg attgtgtcgc tagcttgcaa tctccggacc aagcgaaatc gagccagagc
      901 ctgggccaga ggcctgcaaa gccctgtgtg gtggaaccgg aggtacttca tttaagagga
      961 cgcctgtcca ggacccgttg ttcagatgtc ctttgccata atgttaacct tggaacagcc
     1021 ttgcctgtgg agaagccggc ttgaccatga tgccaagttc cagatctttt tgtgccagga
     1081 caggtgggga ggggggtttt accagtgttc ttaactatac tgtgattttt attattgcca
     1141 tgtccagctt ttaagtgggg ttttaacggt tttataataa ataaaagttt caggcagaag
     1201 aaaggaccat gtgtttgact tacacaagga g
//
