LOCUS       NM_172854               2409 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus olfactomedin-like 2A (Olfml2a), mRNA.
ACCESSION   NM_172854
VERSION     NM_172854.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Manabe,R., Tsutsui,K., Yamada,T., Kimura,M., Nakano,I., Shimono,C.,
            Sanzen,N., Furutani,Y., Fukuda,T., Oguri,Y., Shimamoto,K.,
            Kiyozumi,D., Sato,Y., Sado,Y., Senoo,H., Yamashina,S., Fukuda,S.,
            Kawai,J., Sugiura,N., Kimata,K., Hayashizaki,Y. and Sekiguchi,K.
  TITLE     Transcriptome-based systematic identification of extracellular
            matrix proteins
  JOURNAL   Proc Natl Acad Sci U S A 105 (35), 12849-12854 (2008)
   PUBMED   18757743
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Furutani,Y., Manabe,R., Tsutsui,K., Yamada,T., Sugimoto,N.,
            Fukuda,S., Kawai,J., Sugiura,N., Kimata,K., Hayashizaki,Y. and
            Sekiguchi,K.
  TITLE     Identification and characterization of photomedins: novel
            olfactomedin-domain-containing proteins with chondroitin
            sulphate-E-binding activity
  JOURNAL   Biochem J 389 (Pt 3), 675-684 (2005)
   PUBMED   15836428
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK035313.1.
            
            On Apr 6, 2007 this sequence version replaced NM_172854.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK035313.1, BC137871.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2409              AK035313.1         2-2410
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 24.42 cM"
     gene            1..2409
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /note="olfactomedin-like 2A"
                     /db_xref="GeneID:241327"
                     /db_xref="MGI:MGI:2444741"
     exon            1..202
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..2143
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /note="olfactomedin-like protein 2A; photomedin-1"
                     /codon_start=1
                     /product="olfactomedin-like protein 2A precursor"
                     /protein_id="NP_766442.1"
                     /db_xref="CCDS:CCDS16013.1"
                     /db_xref="GeneID:241327"
                     /db_xref="MGI:MGI:2444741"
                     /translation="MEAAAVLPRYLQLRLLLVLLLLVLLRAGPVWPDSKVFSDLDQVR
                     MTSEGSDCRCKCIMRPLSKDACSRVRSGRARVEDFYTVETVSSGADCRCSCTAPPSSL
                     NPCENEWKMEKLKKQAPELLKLQSMVDLLEGALYSMDLMKVHAYIQKVASQMNTLEES
                     IKANLSLENKVVKDSVHHLSEQLKSYENQSAIMMSIKKELSSLGLQLLQRDAAAVPAT
                     APASSPDSKAQDTAGGQGRDLNKYGSIQKSFSDKGLAKPPKEKLLKVEKLRKESIKGR
                     IPQPTARPRALAQQQAVIRGFTYYKAGRQEARQEARQEAPKAAADSTLKGTSWLEKLP
                     PKIEAKLPEPNSAKHDDVRLQASEGGNLTPDITTTTTSTSSSTTTTTGTTSTTSTTST
                     TSTTTPSPITTPWPTEPPLHPEVPSQGREDSCEGTLRAVDPPVKHHSYGRHEGAWMKD
                     PAALDDRIYVTNYYYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYN
                     RAFTKNIIKYDLRQRFVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAV
                     DEHDETQHEVIVLSRLDPADLSVHRETTWKTRLRRNSYGNCFLVCGILYTVDTYNQHE
                     GQVAYAFDTHTGTDAHPQLPFLNEYSYTTQVDYNPKERVLYAWDNGHQLTYTLHFVV"
     exon            203..466
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     exon            467..574
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     exon            575..784
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     exon            785..1058
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     exon            1059..1352
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     exon            1353..1538
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
     exon            1539..2409
                     /gene="Olfml2a"
                     /gene_synonym="4932431K08Rik; mFLJ00237"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggggcgccc cctcggcaga gctgggctgc aggccgagct cgcagtactg ccggcgctac
       61 ctagcgtgcg cgcagaggtg tcggagccca tccagccatg gaagcggcag ctgtcctgcc
      121 taggtaccta cagttgaggc ttctgctggt gctgctgctg ctggttttgc ttcgggctgg
      181 tcctgtgtgg cccgacagta aggtattcag tgacctggac caggttcgga tgacctcaga
      241 gggctctgac tgccgctgca aatgcatcat gcgaccgctg agcaaggatg catgcagccg
      301 ggtgcgaagt gggcgagcac gagtagagga cttctacact gtggagacag tgagctccgg
      361 ggctgactgc aggtgctcct gcaccgcccc gccctcctca ctcaacccct gtgagaacga
      421 gtggaagatg gagaaactga agaagcaggc acctgagctc ctcaagctgc agtctatggt
      481 ggatctcctg gagggtgccc tgtacagcat ggatctgatg aaagtgcatg cctacatcca
      541 gaaggtggcc tcccagatga atacgctgga ggagagcatc aaggccaacc tgagcctgga
      601 gaacaaggtg gtgaaagaca gcgtacacca cctcagtgag caactgaaga gctatgagaa
      661 ccagtcagcc atcatgatga gcatcaagaa ggagctgtct agcctgggcc tccagttgct
      721 gcagagggat gcagccgctg tccctgccac tgccccagcc tcaagccccg acagcaaggc
      781 tcaggacaca gctggagggc aaggcagaga tctcaacaaa tatggcagca tacagaagag
      841 cttctcagac aagggcctgg caaagcctcc caaggagaag ctgctgaaag tggagaagct
      901 gaggaaggag agcatcaagg gcagaatacc ccagcccaca gccaggccac gtgcgctggc
      961 tcagcagcag gcagtgatcc gaggcttcac ctactacaag gcaggcagac aggaggccag
     1021 acaggaggcc agacaggagg cacccaaggc tgccgctgac agcaccctca aaggaacttc
     1081 ctggctggag aagctaccac ccaagataga ggccaaactt ccggaaccta actctgccaa
     1141 acatgatgac gtccggctgc aggcttcaga aggaggcaac ttgacccctg acattaccac
     1201 caccaccacc agtaccagca gcagcaccac caccactact ggcaccacca gcaccaccag
     1261 caccaccagc accaccagca ccaccacccc aagccctatc accactccct ggcctactga
     1321 gccacctttg catccagaag tccccagcca aggtcgggag gacagctgtg agggcacact
     1381 cagagctgtg gatccccctg tgaaacacca cagttatggg cgccatgagg gggcctggat
     1441 gaaggaccct gcagctcttg atgacaggat ctatgtcacc aactactact acggaaacag
     1501 cctggtggag tttcgaaacc tggaaaattt caaacaaggc cgatggagta atatgtataa
     1561 actaccctac aactggatag gcacaggcca tgttgtgtac cagggtgcct tctactacaa
     1621 ccgtgccttc accaagaata tcatcaaata tgacctgcgc caacgctttg tggcctcctg
     1681 ggccctgctg cctgatgtgg tctatgagga caccacaccc tggaagtggc gtggccactc
     1741 ggacattgat tttgccgtgg atgagagcgg cctgtgggtc atctacccag ctgtggatga
     1801 gcatgacgaa acacagcatg aggtgattgt gttgagccgc ctggacccag cagacctctc
     1861 tgtgcaccgg gagaccacgt ggaagacacg gctgaggagg aactcctatg ggaactgctt
     1921 tctggtgtgc ggcatcctct acaccgtgga cacttacaac cagcatgaag gccaggtggc
     1981 ctatgcgttc gacacccaca ctggcactga tgctcaccca cagttgccct tcctcaatga
     2041 gtattcctat accacccagg ttgactacaa ccccaaggag cgggtgctct atgcctggga
     2101 caatggccac cagctcactt acactctcca ctttgtggtc tgagtgggca tctatgttca
     2161 caagggagag cagcagagga gaaagggcta tccctagcaa ctcttgcaat tgatataagt
     2221 atcgtttggg ggtgtcctgg gctaggtatt ggctttgatg gctttgagtg ctttctcagt
     2281 gcccagtagg tgacacttcc acagcaacgc tgcgccggga gctttccctg cgctttccct
     2341 tttgactctc tctacttctt cccttaagcc tgttgagtag atgaagtgac taaagcccaa
     2401 aggagcagc
//
