LOCUS       NM_001042653            1557 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus Opa interacting protein 5 (Oip5), mRNA.
ACCESSION   NM_001042653
VERSION     NM_001042653.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Sun,Q., Luo,M., Gao,Z., Han,X., Wu,W. and Zhao,H.
  TITLE     Long non-coding RNA OIP5-AS1 aggravates acute lung injury by
            promoting inflammation and cell apoptosis via regulating the
            miR-26a-5p/TLR4 axis
  JOURNAL   BMC Pulm Med 21 (1), 236 (2021)
   PUBMED   34261477
  REMARK    GeneRIF: Long non-coding RNA OIP5-AS1 aggravates acute lung injury
            by promoting inflammation and cell apoptosis via regulating the
            miR-26a-5p/TLR4 axis.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Inoue,K., Maeda,N., Mori,T., Sekimoto,R., Tsushima,Y., Matsuda,K.,
            Yamaoka,M., Suganami,T., Nishizawa,H., Ogawa,Y., Funahashi,T. and
            Shimomura,I.
  TITLE     Possible involvement of Opa-interacting protein 5 in adipose
            proliferation and obesity
  JOURNAL   PLoS One 9 (2), e87661 (2014)
   PUBMED   24516558
  REMARK    GeneRIF: Increase of Oip5 may associate with development of
            obesity.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1557)
  AUTHORS   Naetar,N., Hutter,S., Dorner,D., Dechat,T., Korbei,B., Gotzmann,J.,
            Beug,H. and Foisner,R.
  TITLE     LAP2alpha-binding protein LINT-25 is a novel chromatin-associated
            protein involved in cell cycle exit
  JOURNAL   J Cell Sci 120 (Pt 5), 737-747 (2007)
   PUBMED   17284516
REFERENCE   4  (bases 1 to 1557)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ046601.1, BC115883.1 and AK045323.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC116660.1, AK017825.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164143 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-451               CJ046601.1         2-452
            452-620             BC115883.1         408-576
            621-1557            AK045323.1         824-1760
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 59.97 cM"
     gene            1..1557
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="Opa interacting protein 5"
                     /db_xref="GeneID:70645"
                     /db_xref="MGI:MGI:1917895"
     exon            1..348
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..770
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="opa-interacting protein 5 homolog"
                     /codon_start=1
                     /product="protein Mis18-beta"
                     /protein_id="NP_001036118.1"
                     /db_xref="CCDS:CCDS38205.1"
                     /db_xref="GeneID:70645"
                     /db_xref="MGI:MGI:1917895"
                     /translation="MATLSRRSLRFLETQSRRDSCDTPFSLTSSMEWDTQVVEGFSPL
                     GSSESKVKASPVDLRLPAWLEPERCAVFHCARCYAVLGDTLHLAWDLSRSLGALAFSK
                     VTNNVVLLEPFLVGIEGFLKSSTYNLLFCNSCGTPVGFHLYSTHAAMAALRGHFCLSS
                     DKMLCYLLKTNAIVNTSEMDFHNVPLPEKIAELKEKIMLMHTRLNSLTGLLKGKSPHQ
                     FKQENQQARKQHILGLTASPKIL"
     exon            349..415
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /inference="alignment:Splign:2.1.0"
     exon            416..538
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /inference="alignment:Splign:2.1.0"
     exon            539..620
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /inference="alignment:Splign:2.1.0"
     exon            621..724
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /inference="alignment:Splign:2.1.0"
     exon            725..1557
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      966..971
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="hexamer: GATAAA"
     polyA_site      991
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="major polyA site"
     regulatory      1095..1100
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="hexamer: ATTAAA"
     polyA_site      1119
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
     regulatory      1135..1140
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="hexamer: AATAGA"
     polyA_site      1153
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
     regulatory      1369..1374
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="hexamer: AATAAA"
     polyA_site      1388
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
     regulatory      1390..1395
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
                     /note="hexamer: AATAAA"
     polyA_site      1413
                     /gene="Oip5"
                     /gene_synonym="5730547N13Rik; Lint-25; Ms18b"
ORIGIN      
        1 gggacttgga gcgtgcgaga aagaggcgcg cgcttcaaag aaatatggcg actctctcgc
       61 gccgcagtct tcgcttcttg gagacccagt cacgtcgtga ctcttgtgat acaccttttt
      121 ctcttacctc ctccatggag tgggacactc aggtggtgga agggttctcc cctctcgggt
      181 cctccgagtc taaggtgaag gcgtcacctg tcgacctgcg gctgcctgcg tggttggagc
      241 cggagagatg tgccgtgttt cattgcgcgc ggtgctacgc ggtgctcggc gacaccctgc
      301 acctcgcctg ggacctgtcg cggtccctcg gcgccctggc cttctccaaa gtcacaaaca
      361 acgtcgtttt gttagagccc tttttggttg gcatagaagg ttttctcaag tccagcacat
      421 acaacctttt attctgtaat tcctgtggga ctcctgttgg tttccattta tattctaccc
      481 atgctgctat ggctgccttg agaggccatt tctgcctttc tagtgataaa atgctgtgct
      541 atctgttaaa aacaaatgcc atagtaaata catctgaaat ggattttcat aatgtacctt
      601 taccagaaaa gattgcagag ctgaaagaga agataatgct aatgcatact cgtctaaact
      661 cactgacggg gcttctgaag ggaaagtctc ctcatcagtt taagcaagaa aaccaacaag
      721 caaggaaaca acacatcttg gggttaacag catcaccaaa gatcctgtaa catgtgactc
      781 tattacttta aatttatttt agtacattta ctccataatg cctatttctg aaaatgtatt
      841 tcactactaa taattaatta gcatgcagtg tcccttgtgt ccactgttga aaaaatgaag
      901 ttggccagga taaagcgatg gaggtaatag tgattgtact ctgacatgcc agttttatga
      961 aaactgataa atacttgttc ctttgttttg agatagggtc tttctatata gctttggccg
     1021 tcctggaact ttctatatag accagggtag ccttaaactt acagagatcc acatgcctct
     1081 gcttctctgc tagaattaaa gaatgtcaca gagaaatcat ctttgcttat gtaaaataga
     1141 tgtgtacatt ggatgctggt ggtgcatgcc tttaatccca acactctgga ggcagaagtg
     1201 ggcagataga tcagttcatg accagcctga tctacagagt gagttctagg acagacaagt
     1261 ctacacagag aaaccctgtc tgaacaaaac agcagcaaca gcaaatgtat gtatgtatat
     1321 atatatatat gtacatatat atatatatgt atgtaataag taacagttaa taaatagaat
     1381 acattgtaca ataaagaatt caggggccag cgagatggct cagtggttgg gagcaccaac
     1441 tgctcttccg aaggtcccga gtttgggtcc cagcaaccac atggtggctc acaaccatcc
     1501 ctaaggaaat ctgatgccct cttctagagt atctggaaac agctacagtg tacttac
//
